Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc9g00042 ATGAGGCATATTGGAGTTGTCTTCCCAAGTGTGTCAAAACTTTACAACGCCTTGCTAGGAACCAGGATATCCCACAAGAATACACTTATTATGGTAAAAACAATGAGGGCTCTTAAATACTTTCCGACGGTTGAAGATCCAAATACCAGAAGGTCATTGTTTGAGAGGATACTACTGGGCACTGATGTTGTAAAAAATGTGAACAAAAATATTGCATCCCATGCTGTTCTTTTTGAAGCCCTTGCTGTGGTGATGCACCATGATGCTGAAAGGGAGATGATGACTCAATGTGTGTCTCTTCTTGGAAAATTTATTTCTTTCCGTGAACCAAACATTCAATATCTTGGCTTGGAGAATAAGACTAGAATGTTGATGGTCACAGACGGGCAAGATATGATAAAAAAAAACATCGAGCCCGGATTATTACTTCTCCGAAGGTTCCTGACATCAGTCGAGGAACTACTACAGTATCTAAAAGCAGCAGAGTTTGCAATGCGTGAGGAATTATCTCATAAAGCAGCTATTCTAGCTGAGAAGTTTGCTCCAGATCTTTCATGTTTGTTACAAACAATGAAGGGGGTTCTAATTTTAAGTGAGTTTGCAGGAGCTGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAACGTCACAGAGGTTGCTGCTTCTATTTGTTATGCATTGGATATGCCAGCTGATGAAAGAGAAAAACGGCATCAAGTTAACTTCAAGCATGTGAGGTTTTAG 753 0.4037 MRHIGVVFPSVSKLYNALLGTRISHKNTLIMVKTMRALKYFPTVEDPNTRRSLFERILLGTDVVKNVNKNIASHAVLFEALAVVMHHDAEREMMTQCVSLLGKFISFREPNIQYLGLENKTRMLMVTDGQDMIKKNIEPGLLLLRRFLTSVEELLQYLKAAEFAMREELSHKAAILAEKFAPDLSCLLQTMKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAASICYALDMPADEREKRHQVNFKHVRF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc9g00042 250 Gene3D - 3 153 IPR011989 -
Stsc9g00042 250 Pfam Glycosyltransferase family 20 189 248 IPR001830 GO:0003824|GO:0005992
Stsc9g00042 250 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 30 130 - -
Stsc9g00042 250 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 191 249 - -
Stsc9g00042 250 Gene3D Glycogen Phosphorylase B; 154 250 - -
Stsc9g00042 250 SUPERFAMILY ARM repeat 23 198 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc9g00042 Stsc-Chr9 289322 291468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc9g00042 189 249 Trehalose Biosynthesis Gene Families AT1G78580 78.689 9.92e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc9g00042 K11824 - sind:105170779 221.09