Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc9g00010 ATGTCAGTGTCGATGGAGAATAATCCACTTGAACTTGGGAGACCTGTAACAAGTAAAAGAAAATTCAAGGACTTATTGCTTCAAAAGGATAATCAATGTTGTGCTGATTGTAATGCTGCACAACCTAAATGGGCGTCGGCTAATATTGGAGTTTTTTTATGCTTTAAATGTTACAATGTGCACAGAAGTCTTGATGATCATATATCAAGGGTTTTGCCTTTGGGGGATGAATGGTCAGATGATGATATTGATGCAATGGTTGAAGTTGGAGGAAATTCTTCTGCTAATTCAATTTATGAATCTTATATTCCAGAAGGATATGCAAAACCCAGTCCAGATGCCAGTCAGGAGGAACGCACAAAATTCATACGATAG 375 0.376 MSVSMENNPLELGRPVTSKRKFKDLLLQKDNQCCADCNAAQPKWASANIGVFLCFKCYNVHRSLDDHISRVLPLGDEWSDDDIDAMVEVGGNSSANSIYESYIPEGYAKPSPDASQEERTKFIR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc9g00010 124 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 14 124 IPR044518 GO:0005096|GO:0005543
Stsc9g00010 124 CDD ArfGap 22 124 - -
Stsc9g00010 124 Pfam Putative GTPase activating protein for Arf 20 124 IPR001164 GO:0005096
Stsc9g00010 124 ProSiteProfiles ARF GTPase-activating proteins domain profile. 19 124 IPR001164 GO:0005096
Stsc9g00010 124 PRINTS HIV Rev interacting protein signature 50 67 IPR001164 GO:0005096
Stsc9g00010 124 PRINTS HIV Rev interacting protein signature 31 50 IPR001164 GO:0005096
Stsc9g00010 124 SUPERFAMILY ArfGap/RecO-like zinc finger 19 124 IPR037278 -
Stsc9g00010 124 MobiDBLite consensus disorder prediction 104 124 - -
Stsc9g00010 124 SMART arf_gap_3 20 124 IPR001164 GO:0005096
Stsc9g00010 124 Gene3D Arf GTPase activating protein 11 124 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc9g00010 Stsc-Chr9 70531 72897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc9g00010 12 124 C2H2 Transcription Factor Family AT4G21160 63.158 1.62e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc9g00010 K12486 - fve:101308158 190.274