Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc98g00012 ATGGTTCCTAGTGAGATGAGAAATCTCAATCATCACTACTATCTATCACAAGAAAATAACCAATTCTTGTTTCCACCAAACTTCACCTTATTACAAAATGACATATCAAACATTCACCTAAATACCCTCTTAACACAATTTCCAAACTACTATCTACAACATTCATTATTAGGGTATAATAGTAATAATACTACTAATAATGAACTTCTTGTTCCTCCTTCATGCCTTAGTAGTAACTCAACTACTTCTGATGAAGCTGAAGAGAACCAACTCAACATCATTGATGAGAGGAGGCAGAAGAGGATGATATCGAACCGCGAATCGGCACGGAGATCGAGGATGAGAAAGCAGAAGCACTTGGATGAATTATGGTCGCAGGTTGTGAGGCTCAGAAATGAGAATCACAACCTTATTGATAAACTCAACCACGTTTTTGAGAGTCATGAAAGGGCGATACAAGAGAATGCGCGACTTAAGGAAGAAGCTTCAGATCTTCGCCAAATGCTCACAGAACTCCAACTTGCAACCGCCGCCACCACCACTTTTTCCGGTGGTAGAGATGAATTGCTATGA 573 0.3979 MVPSEMRNLNHHYYLSQENNQFLFPPNFTLLQNDISNIHLNTLLTQFPNYYLQHSLLGYNSNNTTNNELLVPPSCLSSNSTTSDEAEENQLNIIDERRQKRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDKLNHVFESHERAIQENARLKEEASDLRQMLTELQLATAATTTFSGGRDELL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc98g00012 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 95 144 IPR004827 GO:0003700|GO:0006355
Stsc98g00012 190 SUPERFAMILY Leucine zipper domain 97 146 IPR046347 GO:0003700|GO:0006355
Stsc98g00012 190 CDD bZIP_plant_GBF1 98 142 IPR045314 GO:0003700|GO:0006355
Stsc98g00012 190 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 100 115 IPR004827 GO:0003700|GO:0006355
Stsc98g00012 190 Gene3D - 95 150 - -
Stsc98g00012 190 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 12 179 IPR044521 -
Stsc98g00012 190 SMART brlzneu 93 157 IPR004827 GO:0003700|GO:0006355
Stsc98g00012 190 FunFam BZIP transcription factor 95 146 - -
Stsc98g00012 190 Coils Coil 141 175 - -
Stsc98g00012 190 Pfam bZIP transcription factor 97 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc98g00012 Stsc-Chr98 73725 74482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc98g00012 12 190 bZIP Transcription Factor Family AT3G30530 49.189 1.36e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc98g00012 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc98g00012 - - adu:107478924 286.574