Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc98865g00001 ATGGCACAAGGTGATGTGGCTTCTCAACAGATCACTCAAATCGAAGAGCAGCCTGATCATTCAGTTAGAGATGAATTAGAGGGTGGAGCCCGTCCATTGAATTCGATTGAAGAAGTGCTAAATATGACTGATGAAGGTGAGTGTTGGATTCTTGGCAGTATCGTTTCTGTTGAGAGTGGTGTCCATGATTGGTGCTACTTAGCATGTAACAACTGTCCTAAGAAAGTCATTGAGGTAAAGAATGGATACAAATGTAAAAAGTGCTTCAGAATCCTTGCTGATCCACCTGTGAGATATAAGCTGAATATTATAGTTGCTGATGGAACTGGGTGCTTGAATCTGATTGTTTGGAATCAAGAGGGAAAGCTCATTCTTGGGAAATCTGCTAATGAAGTCAGAGCTTTGTTG 408 0.4118 MAQGDVASQQITQIEEQPDHSVRDELEGGARPLNSIEEVLNMTDEGECWILGSIVSVESGVHDWCYLACNNCPKKVIEVKNGYKCKKCFRILADPPVRYKLNIIVADGTGCLNLIVWNQEGKLILGKSANEVRALL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc98865g00001 136 Gene3D - 19 136 IPR012340 -
Stsc98865g00001 136 Pfam Replication factor-A C terminal domain 63 134 IPR013955 -
Stsc98865g00001 136 SUPERFAMILY Nucleic acid-binding proteins 33 135 IPR012340 -
Stsc98865g00001 136 MobiDBLite consensus disorder prediction 1 27 - -
Stsc98865g00001 136 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc98865g00001 Stsc-Chr98865 34 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc98865g00001 66 135 Core DNA Replication Machinery Family AT5G61000 38.028 8.71e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc98865g00001 - K07466 ahf:112718168 164.081