Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc98412g00001 ATGTTTTGTGATGAGGGAGCTGATGGTTCAAATTTTGTTTCAGAGGGGTATGATGATCATATGCCTGGAAACATTCTTAAGGTTGAGCTTTCTAAGTTCATGACATTTGATTACTTGAGTTTCAAACCCGGGCCTCGATTGAATCTTGTAGTTGGACCCAATGGTTCTGGAAAAACTTCTCTCGTGTGTGCTATCACACTTGGCCTTTGCGGAGAGCCTCAGCTTCTTGGGCGAACAACTAGTGTTGGGGCATATGTGAAGCGGGGAGAAGAGTCTGGATCCATTAAGATTACATTGAGAGGGAATAATGAAGATGAGCATATTGTCATTACTCGCAAAATAAATACTAACAACGAGTCTGAGTGGTTGTTAAATGGTAACACTTTCGATGATCATTAG 399 0.4135 MFCDEGADGSNFVSEGYDDHMPGNILKVELSKFMTFDYLSFKPGPRLNLVVGPNGSGKTSLVCAITLGLCGEPQLLGRTTSVGAYVKRGEESGSIKITLRGNNEDEHIVITRKINTNNESEWLLNGNTFDDH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc98412g00001 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 130 IPR027417 -
Stsc98412g00001 132 Pfam AAA domain 27 116 IPR038729 GO:0006302|GO:0016887
Stsc98412g00001 132 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 17 128 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Stsc98412g00001 132 Gene3D - 24 130 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc98412g00001 Stsc-Chr98412 148 629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc98412g00001 13 128 Structural Maintenance of Chromosomes family AT5G15920 67.241 4.30e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc98412g00001 K22803 - gmx:100778678 195.282