Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc96g00021 ATGGCAACAAAATGCGCCATAGGAATCGATCTTGGCACCACTTACTCGTGTGTTGCTGTCTGGGAGGAGCAAAATTCTCGGGCCGAAATCATTCACAACGATCAAGGCAACAGAACAACCCCTTCTTGTGTTGCTTTCACCAATTCACAAAGATTGGTCGGTGATGCTGCAAAAAATCAGGCATCAACCAACCCAACCAACACTGTCTTTGATGCTAAGAGGTTGATTGGCAGGAAATGTAGTGATCCTGTTATTGAGAATGATTTGAAGCTTTGGCCGTTTAAGGTTGTATCTGGTGCTGAAGACAAGCCAAAGATTGTTGTTAACTACAAAGGCCAAGAAAAGCAATTTACTCCTGAAGAGATTTCATCTATGATCCTTACAAAAATGAAGGACATTGCAGGGGCATTTTTAGAATCTTCTGTGACAGATGCTGTTATTACTGTCCCTGCTTATTTCAACGACTCTCAGAGGAAAGCCACAAGAGATGCGGGTACCATTGCCGGCCTAAATGTTATGAGGATCCTCAATGAACCTACTGCGGCAGCTCTTGCCTATGGCCTTCAGAAGAGACCTAATTGTGCCGAAAAGCGCAATGTCTTTGTCTTTGATCTCGGCGGTGGCACCTTTGACGTGTCACTCCTTACAATTAAGGGTGGCAGGTACCAGGTTAAGGCCACCGCCGGTGACACTCATCTAGGAGGAGAGGATTTTGACAACAGAATGGTGACCTTTCTCGCCAGAGAATTCCAAAGGAAGCACAAAGAAGACATGAGTGGGAACTCCAAAGCCTTAAGGAGGTTGAGAAATGAGTGTGAAAAAGCCAAGCGAATACTCTCATATAACAGTGAAGCAACCATTGACATAGATACCTTGTTTAATGGCTTTGACTTCTCTAAAACGATTACTCGCGCGAAGTTTGAGAAACTCAACGATGACCTATTCGAGAAGTGTATGGAAACAGTTAAGAGGTGTCTTGACGATGGCAAAGTCGACAAGAACGATGTACATGACATCGTTCTTGTCGGTGGCTCGTCAAGAATCCCCAAAGTGCAGAAGCTTCTGCAGGAATTCTTTCCTGGAAAGGAACTCTGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTATGGTGCCGCCGTTCAGGCTTCTCTGTTAATTAACAGTAGTCATGGAAGGAATGATAGTAAGACATTGAAAAACTTGGCCCTAATGGATGTTACTCCTCTTTCGCTGGGAACATCTATAAAAGGAGATCTCATGAGTGTTCTGATTCCTAGAAACACTCCAATCCCTGCAAAGAAGAATGGAACATACTTCACAGATTCTGATGACCAACCTACTGTTTGTGTTGATGTGTATGAAGGAGAGAGGTTAAGAGCAAGTGAAAACAACATGCTTGGAATGTTCTCTTTCGAAGTTCCTCCTGCGCCTCGTGGATTTCCGATCTATATATGTTTCGAGGTAAATGAAGATGGGATCCTGAATGTGACTGTGGAGGAGAAACTCACCGGAAAGAAACAAGAGATTGCTATAAGTAATGAGAGAGAAAGGTTGACGGCTGAGGAGGTTGCGAAAATGATTGAAGAAGCTGAGATGTTGAAGGAGGAAGATGAGAGCTACAAGGAGAGAGTTAAGGCTAAGAATGCTTTGGATGAATGCGTGTACAAAGTGAAGAAAGCTATCAAGGATGGCAAGTTTTTTTCTAAGGTTTCGGCATTTGATAAACAGAGGATTATGGGTGCTATTAGAGAAGCAAGAGATTTGGTTAATGATAATGGGGTGGAGCAAGGGGAAACGTATCAGTATGAAAAGTGTTTGATGGAGTTGCAGAGTGTTACTAATGAAATAATGAATAAAATTAACCCTGATGGTGAAGAAAGTGGTAGTGATGAGGATTAA 1899 0.4308 MATKCAIGIDLGTTYSCVAVWEEQNSRAEIIHNDQGNRTTPSCVAFTNSQRLVGDAAKNQASTNPTNTVFDAKRLIGRKCSDPVIENDLKLWPFKVVSGAEDKPKIVVNYKGQEKQFTPEEISSMILTKMKDIAGAFLESSVTDAVITVPAYFNDSQRKATRDAGTIAGLNVMRILNEPTAAALAYGLQKRPNCAEKRNVFVFDLGGGTFDVSLLTIKGGRYQVKATAGDTHLGGEDFDNRMVTFLAREFQRKHKEDMSGNSKALRRLRNECEKAKRILSYNSEATIDIDTLFNGFDFSKTITRAKFEKLNDDLFEKCMETVKRCLDDGKVDKNDVHDIVLVGGSSRIPKVQKLLQEFFPGKELCKSINPDEAVAYGAAVQASLLINSSHGRNDSKTLKNLALMDVTPLSLGTSIKGDLMSVLIPRNTPIPAKKNGTYFTDSDDQPTVCVDVYEGERLRASENNMLGMFSFEVPPAPRGFPIYICFEVNEDGILNVTVEEKLTGKKQEIAISNERERLTAEEVAKMIEEAEMLKEEDESYKERVKAKNALDECVYKVKKAIKDGKFFSKVSAFDKQRIMGAIREARDLVNDNGVEQGETYQYEKCLMELQSVTNEIMNKINPDGEESGSDED 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc96g00021 632 Gene3D - 7 382 - -
Stsc96g00021 632 SUPERFAMILY Actin-like ATPase domain 5 190 IPR043129 -
Stsc96g00021 632 Coils Coil 523 543 - -
Stsc96g00021 632 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 395 546 IPR029047 -
Stsc96g00021 632 Gene3D - 191 365 - -
Stsc96g00021 632 FunFam Heat shock protein 70 7 201 - -
Stsc96g00021 632 Pfam Hsp70 protein 6 620 IPR013126 GO:0005524|GO:0140662
Stsc96g00021 632 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Stsc96g00021 632 PANTHER HEAT SHOCK PROTEIN 70KDA 6 577 IPR013126 GO:0005524|GO:0140662
Stsc96g00021 632 FunFam heat shock 70 kDa protein-like 70 125 - -
Stsc96g00021 632 SUPERFAMILY Actin-like ATPase domain 196 385 IPR043129 -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 208 218 - -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 479 495 - -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 57 65 - -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 336 352 - -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 400 419 - -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 5 18 - -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 35 47 - -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 145 165 - -
Stsc96g00021 632 PRINTS 70kDa heat shock protein signature 368 388 - -
Stsc96g00021 632 Gene3D - 547 621 IPR029048 -
Stsc96g00021 632 Gene3D - 70 125 - -
Stsc96g00021 632 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Stsc96g00021 632 FunFam Heat shock 70 kDa 234 317 - -
Stsc96g00021 632 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 398 551 IPR029047 -
Stsc96g00021 632 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 546 625 IPR029048 -
Stsc96g00021 632 Gene3D Actin; Chain A, domain 4 234 317 - -
Stsc96g00021 632 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc96g00021 Stsc-Chr96 106118 108099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc96g00021 6 632 Calmodulin-binding Proteins AT3G12580 60.726 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc96g00021 K03283 - gmx:102667578 781.941