Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc96g00017 ATGACTCAGTGCAACAATAATAATTACCCTGAGAACAATCACAGCACCATTGTGGAGAGGAACAAAGATACCTTAATTACTAGAACTTGTCCATCATGCGGTCATCATATCAAATACCAACAAGGACACCAGGGTGCTGGAATTCACGATTTACCTGGGCTACCAGCTGGAGTGAAGTTTGATCCAACAGATCAGGAGATTCTAGAACATTTGGAAGCGAAGGTGAGGTCTGATATTCACAAGCTTCACCCCTTAATTGATGAGTTCATCCCTACCCTTGAAGACGAGAATGGAATCTGCTGCACTCATCCAGAAAAGTTGCCAGGTCCTTATCAATTTAATTACTTCAAGCAATACCACCTTGGCAACAATGAAGAGGAGAAGGAAGGTGAGTTAGTTGTGTCTAAGGTTTTCTACCAGACACAACCTAGACAATGTGCAGGTTCACTACTCATCAAAGATTCATCCTTCCCTGCTAAACTAAAGGATCATCAAGCCTCTGTTCATCATCATCATACAGTTACTAATAATAATCATAAGAATAATAATGGGTTTGTGGACTACTACAATGCATCTTTCATAAGCTTTGATCAAGGGGAACAACAACAACATAGGTCTAACAATGCCACATTGATTTCCCATTTTCCTGTCCATGATGCTGCTCCTTTCATTCCTTGA 678 0.4056 MTQCNNNNYPENNHSTIVERNKDTLITRTCPSCGHHIKYQQGHQGAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEDENGICCTHPEKLPGPYQFNYFKQYHLGNNEEEKEGELVVSKVFYQTQPRQCAGSLLIKDSSFPAKLKDHQASVHHHHTVTNNNHKNNNGFVDYYNASFISFDQGEQQQHRSNNATLISHFPVHDAAPFIP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc96g00017 225 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 117 197 IPR044799 GO:0003700
Stsc96g00017 225 Pfam No apical meristem (NAM) protein 55 118 IPR003441 GO:0003677|GO:0006355
Stsc96g00017 225 SUPERFAMILY NAC domain 49 123 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc96g00017 Stsc-Chr96 77563 79076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc96g00017 110 225 NAC Transcription Factor Family AT4G28500 40.310 1.23e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc96g00017 - - gmx:100820039 204.527