Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc96g00001 ATGGGAATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGTGGTCACATTGTTCGGTCCACTGGCCGGAAAGATCGACACAGCAAGGTTTACACGGCGAAAGGGCCGCGTGATCGCCGGGTTAGGCTCTCGGCACACACTGCAATCCAATTCTATGATGTCCAAGACAGGCTTGGCTATGACAGGCCAAGCAAGGCAGTGGACTGGCTCATCAAGAAGGCGAAAGCTGCCATCGACAAACTCGCTGAGCTCCCTCCTTGGGACCCTACTCCTCCTCCCCCCACCAATGAGGTGGAGGAGGAGCAGAATGGAGGCTCAAGTGACATGGCAATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTCCAAAGGCAACTTGGTGAAGACCCTGAAAACCAACACCACCACTCAGCATTCATTCCTTCACCTATTAACACTGATGGTGGCATAGCATTTTTCCCAACAACTTCTGCTGCTTCCTCCATCAATTTCCAGAGCTACCCTCCTGAGATAATCTCAAGGACCAACAACTCCTCAGAGGATCTTGGACTTTCCCTTCATTCTTTCCAAGATTCTGGCCTAATTCATCCTCATGGACAGTCACAACAAGGAGGTGGTGCAGATCATCAAAACCCTTCTTCAAATGACCAAGCCCTCTTTGCTAACTACCAGAGGATGGTGGCCTGGAACAGCGAAGCCGGAGGCACGCAGGCCGACATGAACCGGTCCAGTTTCATGGTGAATTCACCTGGTTTTTCTTCTGCTTTTTCTCATCATCAACAAAGGGGTACCCTTCAGTCCAGTTTCTCACCATCACTTCGCCCTTGGAGTGAGATTCCTCAAATGGCTTCTTCCAATGAGCATCACCACAAGTCTCAGCCAATGCAGCAGCAACACCAGGCTTCAATCTTTGGAAGCAGGTTCCTCTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGGATTCAAGGTGAAGATGAGAGCCATGGTGTTGGTTCTGACAGGCCTTCATCTTCTGCTTCGCCTAATTCACATCACTGA 1050 0.501 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDKLAELPPWDPTPPPPTNEVEEEQNGGSSDMAIAEQSESSGYNFQLQRQLGEDPENQHHHSAFIPSPINTDGGIAFFPTTSAASSINFQSYPPEIISRTNNSSEDLGLSLHSFQDSGLIHPHGQSQQGGGADHQNPSSNDQALFANYQRMVAWNSEAGGTQADMNRSSFMVNSPGFSSAFSHHQQRGTLQSSFSPSLRPWSEIPQMASSNEHHHKSQPMQQQHQASIFGSRFLSDALPGFCIPARIQGEDESHGVGSDRPSSSASPNSHH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc96g00001 349 MobiDBLite consensus disorder prediction 322 349 - -
Stsc96g00001 349 MobiDBLite consensus disorder prediction 83 108 - -
Stsc96g00001 349 Pfam TCP family transcription factor 23 126 IPR017887 -
Stsc96g00001 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 300 IPR005333 GO:0003700
Stsc96g00001 349 MobiDBLite consensus disorder prediction 193 218 - -
Stsc96g00001 349 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Stsc96g00001 349 MobiDBLite consensus disorder prediction 1 30 - -
Stsc96g00001 349 MobiDBLite consensus disorder prediction 197 218 - -
Stsc96g00001 349 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc96g00001 Stsc-Chr96 11891 14728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc96g00001 8 348 TCP Transcription Factor Family AT3G15030 41.266 1.67e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc96g00001 TCP 4.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc96g00001 - - gmx:100814907 467.618