Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc968g00001 ATGATTTGTGGTAACAAAACTGCAAGTGGAGGATCAAATGCTTTCAATCGAGTTGCACAGAGAGTGCTACAAGATTTGCAAACAGCAACACCAAGAATTCCCGGTTACTTTGCAGCTACCAAGACACAATTAGCCGGCGGTGGCGCAATCTACGCCGTCGCACAATGTGCTCAATCAGTGTCTGAGGGTGGTTGTTCGGAATGCTTGAATGTTGGTGTTTCCAACATTCAAAGTTGTCTTCCTAACACTGATGGTAGAGCATATGATGCTGCTTGTTTTATGAGATATTCTGTTACACCATTTTTTACTGATAACCAAGTTATTGATATCACACCATATTTGAAACAACAAGGAGGAGGAAATTTAAGCAACAAAGGGGCTATTATTGGGGGTGTTGTTGGAGGTGCAGTGCTTATTATTCTCTTTGCATTGTTAATGTGGCTTAGAAGAAGACACAAGAAATCACCAAAGAGAGGTCCTAGAGGTGACATATTGGGAGCAACTGAGCTAAAAGGACCAGTTACATATAGGTACAAAGATTTAAAAACCGCAACTAAAAGTTTTAGTGATGAAAATAAACTAGGAGAAGGAGGTTTTGGAGATGTATATAAGGGTACTCTGAAAAATGGAAAAATAGTTGCTGTCAAGAAATTGGCTTTAGGGAAATCAAGAAAAATTGATGAATGTTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTCCACCATAGGAATCTGGTTAGACTTCTTGGATGCTGTAGTAAGGGCCCAGAGAGAATCCTTGTTTATGAGTACATGCCAAATTGCAGCCTTGATAAATACTTATTTGGCACAGCAAGAGGTCTTGCATATCTACATGAGGATTTCCATGTTTGTATCATACACAGAGATATTAAAACTAGCAACATACTCTTGGATGATGATCTTCAACCTAGAATTGCTGATTTTGGTTTAGCAAAGCTTCTACCTGAGGACAAATCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACGGCACCGGAATATGCAATTCATGGTCAATTATCAGAAAAAGCCGATGTTTATAGTTACGGAGTTGTGGTTCTCGAAATCATAAGTGGCCAAAAGAGCAGTGAAATAAGGGATGATGCTGACGGTGAATTCCTTCTTCAAAGGGCATGGAAACTGTACGAGAAAGACATGCACCTGTTGTTAGTAGACCCAACATTGGATCCTGAAGAATATAATTCAGAAGAAGTAAGGAGAATCATAGAAATTGCATTGTTGTGCACTCAAGGCTCAGCTTCAACGAGACCAACAATGTCCGAGGTAATGCTGTTACTCAAAAGCAAGAACTTGTTGATGGAGAATATGATGAGGCCTACTATGCCTGTCTTTGTTCAATCTAATAATGTTAATGTTAGGTCTCAACCAGACACATCTACTTCAACTTCATCTGCATCTGCTTCTAAAGCTACTATTTCTACTTCAGTACTATCAGGTCGCTGA 1491 0.3924 MICGNKTASGGSNAFNRVAQRVLQDLQTATPRIPGYFAATKTQLAGGGAIYAVAQCAQSVSEGGCSECLNVGVSNIQSCLPNTDGRAYDAACFMRYSVTPFFTDNQVIDITPYLKQQGGGNLSNKGAIIGGVVGGAVLIILFALLMWLRRRHKKSPKRGPRGDILGATELKGPVTYRYKDLKTATKSFSDENKLGEGGFGDVYKGTLKNGKIVAVKKLALGKSRKIDECFESEVKLISNVHHRNLVRLLGCCSKGPERILVYEYMPNCSLDKYLFGTARGLAYLHEDFHVCIIHRDIKTSNILLDDDLQPRIADFGLAKLLPEDKSHLSTKFAGTLGYTAPEYAIHGQLSEKADVYSYGVVVLEIISGQKSSEIRDDADGEFLLQRAWKLYEKDMHLLLVDPTLDPEEYNSEEVRRIIEIALLCTQGSASTRPTMSEVMLLLKSKNLLMENMMRPTMPVFVQSNNVNVRSQPDTSTSTSSASASKATISTSVLSGR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc968g00001 496 Pfam Protein kinase domain 189 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc968g00001 496 ProSiteProfiles Protein kinase domain profile. 188 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc968g00001 496 FunFam Cysteine-rich receptor-like protein kinase 2 268 450 - -
Stsc968g00001 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Stsc968g00001 496 FunFam Cysteine-rich receptor-like protein kinase 2 150 264 - -
Stsc968g00001 496 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 481 - -
Stsc968g00001 496 ProSiteProfiles Gnk2-homologous domain profile. 1 101 IPR002902 -
Stsc968g00001 496 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Stsc968g00001 496 MobiDBLite consensus disorder prediction 468 496 - -
Stsc968g00001 496 FunFam Cysteine-rich receptor-like protein kinase 2 1 101 - -
Stsc968g00001 496 Gene3D Phosphorylase Kinase; domain 1 164 264 - -
Stsc968g00001 496 Pfam Salt stress response/antifungal 3 97 IPR002902 -
Stsc968g00001 496 SMART serkin_6 188 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc968g00001 496 Gene3D - 1 101 IPR038408 -
Stsc968g00001 496 CDD STKc_IRAK 194 438 - -
Stsc968g00001 496 SUPERFAMILY Protein kinase-like (PK-like) 172 476 IPR011009 -
Stsc968g00001 496 Gene3D Transferase(Phosphotransferase) domain 1 265 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc968g00001 Stsc-Chr968 222 4118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc968g00001 1 496 Receptor kinase-like Gene Family AT1G70520 38.241 4.72e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc968g00001 Pkinase 9.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc968g00001 - - gmx:100813585 702.59