Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc96167g00001 ATGGGACCCAGCCTCAAAAGCCAATCTAACCTCTTCATAGCACCCCAATCTGGGAATAAGGAGGTGACATGGAGAAACGGCAATGGCGAAAACGGGAAGATGTGGGAATTCCATTCAGTAGGGGATGCTTTTGAAAATGGAGCGTCTTTCACAGTAACAAAAGGAGGACGTGTGCCAAAGCCAAATTATAGTAAAGAACAATATTTTAAAGTTCTTGATGCTAAATCTGTCAGATTTTTGACAAAATCGTCTGGCGTACTATGA 264 0.4205 MGPSLKSQSNLFIAPQSGNKEVTWRNGNGENGKMWEFHSVGDAFENGASFTVTKGGRVPKPNYSKEQYFKVLDAKSVRFLTKSSGVL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc96167g00001 87 Gene3D - 1 87 IPR012334 -
Stsc96167g00001 87 MobiDBLite consensus disorder prediction 1 26 - -
Stsc96167g00001 87 MobiDBLite consensus disorder prediction 1 28 - -
Stsc96167g00001 87 PANTHER PECTATE LYASE 18-RELATED 1 87 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc96167g00001 Stsc-Chr96167 258 597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc96167g00001 2 87 Polysaccharide Lyase AT3G07010 38.636 2.23e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc96167g00001 K01728 - ahf:114927717 155.221