Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc96147g00001 AAGGGAACTCGCTTGTTCATCAATCTATGGAAGCTCCATAGGGATCCCAAAACATGGTCTAATCCTAATGATTTTGGGCCTGAGAGGTTCCTTAATGCTTGTTCGGGGTTCGATTTTCGCGGTCAGGATTTCGAGTTTCTCCCATTTAGCTCAGGACGAAGGTCGTGCCCCGGGATGACGTTTGGAATGCAAGTTGTGCATCTGACGCTGGCGAGGTTGATTCAAGGTTTTGATATGTCAACAAAGGATGGTGGTGAAGTTGATATGAGTGAAGGGTTGGGTGTGGCCTTGCCTAAGAAAAATGCACTTGATATTCTTCTCAAACCTCGTCTTCCTTTGGAGCTATATGAAGGCCTTTGA 360 0.4611 KGTRLFINLWKLHRDPKTWSNPNDFGPERFLNACSGFDFRGQDFEFLPFSSGRRSCPGMTFGMQVVHLTLARLIQGFDMSTKDGGEVDMSEGLGVALPKKNALDILLKPRLPLELYEGL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc96147g00001 119 Pfam Cytochrome P450 1 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc96147g00001 119 PRINTS E-class P450 group I signature 8 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc96147g00001 119 PRINTS E-class P450 group I signature 46 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc96147g00001 119 PRINTS E-class P450 group I signature 56 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc96147g00001 119 SUPERFAMILY Cytochrome P450 1 110 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc96147g00001 119 Gene3D Cytochrome P450 1 110 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc96147g00001 119 PANTHER CYTOCHROME P450 82C3-RELATED 1 116 - -
Stsc96147g00001 119 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 49 58 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc96147g00001 Stsc-Chr96147 30 500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc96147g00001 2 116 Cytochrome P450 AT4G31940 51.724 2.15e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc96147g00001 K17961 - gmx:100791088 181.8