Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc95991g00001 ATGGCTCATGGCATGCAACTCTTTGATTATACAAAGATTGATGCTAGGTTTAACGAGGTTTTCAACAAAGCAATGAACAGTGCCTCCTTTATATTAATGAAGAAGATCCTTGATATTTATCAAGGCTTTGAGAACGTGAATAAACTAGTCGACGTTGGTGGTGGTTTTGGAATAATTACCAAATTAATTATTTCCAAATACCCTCATATTCATGGCATCAATTTTGATTTGCCACATGTCATAGAACATGCCCCTGCCCATCCTG 265 0.3698 MAHGMQLFDYTKIDARFNEVFNKAMNSASFILMKKILDIYQGFENVNKLVDVGGGFGIITKLIISKYPHIHGINFDLPHVIEHAPAHP 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc95991g00001 88 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 87 IPR029063 -
Stsc95991g00001 88 Gene3D Vaccinia Virus protein VP39 18 88 IPR029063 -
Stsc95991g00001 88 Gene3D - 4 36 IPR036388 -
Stsc95991g00001 88 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 88 IPR016461 GO:0008168
Stsc95991g00001 88 Pfam O-methyltransferase domain 2 87 IPR001077 GO:0008171
Stsc95991g00001 88 PANTHER O-METHYLTRANSFERASE 1 84 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc95991g00001 Stsc-Chr95991 240 504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc95991g00001 2 88 Monolignol Biosynthesis Gene Families AT5G54160 60.920 7.88e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc95991g00001 K13066 - vun:114162418 127.102