Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc95584g00001 ATGCATGCAGATAGCAAAGACTGGGTTCTAATGGCTTTTGGTGTAATTGGGGCCATTGGTGAAGGTTCCACCGCTCCTCTTATGCTCTACCTTAGTAGCCTCATTATGAACAATATGGGCACTTTTTCTACCATGTCAACGCCTACTTTTGTCCATTGCATCAACAAGAATGCCGTGGCTTGGTTATATTTGGCTGCTGGAACATTCTTTGCTTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGTGAGAGACAAGCAGCAAGAATGAGAGGAAAGTACCTGAAAGCAGTGATGAGACAAGAAGTTGCATATTTTGATCTGAATGTGACAAGCACTTCAGATGTTATCACTAGCATTTCCAATGACACCCTCCTCATTCAGGATGTTATTAGTGACAAG 402 0.4279 MHADSKDWVLMAFGVIGAIGEGSTAPLMLYLSSLIMNNMGTFSTMSTPTFVHCINKNAVAWLYLAAGTFFACFLEGYCWTRTSERQAARMRGKYLKAVMRQEVAYFDLNVTSTSDVITSISNDTLLIQDVISDK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc95584g00001 134 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 12 133 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc95584g00001 134 PANTHER ABC TRANSPORTER B FAMILY 1 134 IPR039421 -
Stsc95584g00001 134 SUPERFAMILY ABC transporter transmembrane region 6 132 IPR036640 GO:0005524|GO:0016020
Stsc95584g00001 134 Gene3D ABC transporter type 1, transmembrane domain 1 134 IPR036640 GO:0005524|GO:0016020
Stsc95584g00001 134 Pfam ABC transporter transmembrane region 12 134 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc95584g00001 Stsc-Chr95584 328 1558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc95584g00001 3 134 Calmodulin-binding Proteins AT2G36910 35.606 8.82e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc95584g00001 K05658 - gmx:100809399 191.43