Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc95402g00001 ATGGGTAGTGATGGAAAAGCAGCATCATCATCAGTAGCCATAGGAATAGACCTTGGAACAACATACTCGTGTGTTGCAGTGTGGCGCCATGATCGAGTTGAGATCATAGCCAACGACCAAGGGAACAGAATCACACCTTCTTATGTTGCATTCACTGATACTCACAGAATGATCGGAGATGCTGCTAAGAATCAAGTTGCTGCCAACCCTACCAACACTGTCTTTGACTCAAAGAGGTTAATTGGTAGAAAGTTCAGTGACCCTCATGTCCAGAATGACATGAAACTGTGGCCATTTCAAGTTATTGCCAATGCTGATGACATTCCAAGGATTATTGTTGAGCACAAATGTGAGAAAAAGTCTTTCACAGCTGAGGAAATCTCTTCAATGATCTTAGTAAAGATGCGCGAAATAGCAGAGCAATTTCTTGGAACGCAAGTAAAGGATGCAGTCATTACAGTCCCTGCTTATTTCAATGACTCTCAGCGCCAAGCTACCAAAGATGCCGGCCTCATCGCCGGCCTCAATGTGCTGAGCATACTCAATGAGCCAAGTGCTGCAGCAATCGCTTATGGCCTCGACACTAAAGATGATTCTAGTCATGTTCATGGAAACAGGACTATTTTCGTGTTTGATTTCGGCGGCGGAACTTTGGATCTTACTCTTCTTACAATTGACAAGAAAGGGAACATAAAAGTGAAGATTCATGGTGGAGACACACATCTTGGTGGAGAGGATTTTGATGCTGCAATGGTTGAATTCTTTGCGACTGAGTTTCAGAGAAAGAAAAGGATTGATCTTAGAAACAACAAAAGAGCCATATGCAGGTTGAAGGTTGCTTGTGAGAGAGCAAAGAGGATTCTCTCTTCAACAACTGATGCCTCCATTGAGCTAGATTCCTTGCATCAGGGGCTTGATTTCTATACATCAATCACTCGTGCGAAGTTCGAGGAAATCAGCAAGATTCTCTTTGAGAGATGCATGGAGCTTGTGGATAAGTGTTTCGCGGATGCTGACATGGACAAGAGCAATGTTGATGAGGTTGTCCTTGTAGGTGGATCCACAAGGATTCTGAAATTGGAGCAGCTTTTGAAGGAGTTCTTTGATGGCAAAGATCTTTGCAAGAAGTGCATCAATGCGGACGAGGCTGTTGCTTATGGTGCTGCAATCCATGCTTCTAAGCTGTGTGGTGCTGGTGATGAAAAGATTCAAGATTTGAAGATCTGTGAAGTTACTCCTCTGTCACTTGGCTTGCAAGAAGAAGGTGATTTAATGAAAGTTATAGTTCCTAGGAACACCAGTGTTCCTACAAAGATGGAGCATCTTTTTACAAC 1334 0.4318 MGSDGKAASSSVAIGIDLGTTYSCVAVWRHDRVEIIANDQGNRITPSYVAFTDTHRMIGDAAKNQVAANPTNTVFDSKRLIGRKFSDPHVQNDMKLWPFQVIANADDIPRIIVEHKCEKKSFTAEEISSMILVKMREIAEQFLGTQVKDAVITVPAYFNDSQRQATKDAGLIAGLNVLSILNEPSAAAIAYGLDTKDDSSHVHGNRTIFVFDFGGGTLDLTLLTIDKKGNIKVKIHGGDTHLGGEDFDAAMVEFFATEFQRKKRIDLRNNKRAICRLKVACERAKRILSSTTDASIELDSLHQGLDFYTSITRAKFEEISKILFERCMELVDKCFADADMDKSNVDEVVLVGGSTRILKLEQLLKEFFDGKDLCKKCINADEAVAYGAAIHASKLCGAGDEKIQDLKICEVTPLSLGLQEEGDLMKVIVPRNTSVPTKMEHLFTT 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc95402g00001 445 Pfam Hsp70 protein 13 445 IPR013126 GO:0005524|GO:0140662
Stsc95402g00001 445 SUPERFAMILY Actin-like ATPase domain 205 394 IPR043129 -
Stsc95402g00001 445 FunFam Heat shock protein 70 14 208 - -
Stsc95402g00001 445 ProSitePatterns Heat shock hsp70 proteins family signature 2. 210 223 IPR018181 -
Stsc95402g00001 445 Gene3D - 196 374 - -
Stsc95402g00001 445 FunFam heat shock 70 kDa protein-like 75 130 - -
Stsc95402g00001 445 ProSitePatterns Heat shock hsp70 proteins family signature 1. 16 23 IPR018181 -
Stsc95402g00001 445 Gene3D - 14 391 - -
Stsc95402g00001 445 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 401 445 IPR029047 -
Stsc95402g00001 445 PRINTS 70kDa heat shock protein signature 378 398 - -
Stsc95402g00001 445 PRINTS 70kDa heat shock protein signature 405 424 - -
Stsc95402g00001 445 PRINTS 70kDa heat shock protein signature 345 361 - -
Stsc95402g00001 445 PRINTS 70kDa heat shock protein signature 62 70 - -
Stsc95402g00001 445 PRINTS 70kDa heat shock protein signature 12 25 - -
Stsc95402g00001 445 PRINTS 70kDa heat shock protein signature 216 226 - -
Stsc95402g00001 445 PRINTS 70kDa heat shock protein signature 40 52 - -
Stsc95402g00001 445 PRINTS 70kDa heat shock protein signature 150 170 - -
Stsc95402g00001 445 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 445 IPR029047 -
Stsc95402g00001 445 PANTHER HEAT SHOCK PROTEIN 70KDA 13 444 IPR013126 GO:0005524|GO:0140662
Stsc95402g00001 445 SUPERFAMILY Actin-like ATPase domain 11 195 IPR043129 -
Stsc95402g00001 445 FunFam Heat shock 70 kDa 243 326 - -
Stsc95402g00001 445 Gene3D Actin; Chain A, domain 4 243 326 - -
Stsc95402g00001 445 Gene3D - 75 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc95402g00001 Stsc-Chr95402 1 2151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc95402g00001 13 445 Calmodulin-binding Proteins AT3G12580 65.820 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc95402g00001 K03283 - ini:109156411 582.022