Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc95236g00001 ATGGGCAAAGAGGCTGTTGAGGATTGGAGGCAGTTCAAGCAGGATGTTGAGATGAACAACAGAAGGGTTAAAGTTCACCATAGAGATGGTGTTTTTGACCATTCCAAATGGAGGGATTCGAGAGTTGGAGACATAGTAAAATTGGAAAAAGATGAATTTTTCCCTGCTGATCTCATCTTACTTTTATCGAGCTATGACAACGCGATTTGTTACGTTGAGACCGTGACTCTTGATGGAGAAACTAATCTTAAACTGAAGCAAGCACTGGAAGAAACTTCAAAGTTGCAAGAAGACTCAAAACTTCAGAAATTTCAGTGGTACCATCAAATGTGA 333 0.3994 MGKEAVEDWRQFKQDVEMNNRRVKVHHRDGVFDHSKWRDSRVGDIVKLEKDEFFPADLILLLSSYDNAICYVETVTLDGETNLKLKQALEETSKLQEDSKLQKFQWYHQM 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc95236g00001 110 Gene3D - 4 106 - -
Stsc95236g00001 110 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 103 - -
Stsc95236g00001 110 SUPERFAMILY Calcium ATPase, transduction domain A 25 92 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc95236g00001 Stsc-Chr95236 304 1109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc95236g00001 1 105 Primary Pumps ATPases AT3G25610 61.321 3.93e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc95236g00001 K01530 - gmx:100777629 176.022