Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc94g00023 ATGCAGCAAGATCACAGGAAAAAGAATTCAACGGAGATGGATTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATTCAAGAAGTCATTGGAAAAGGAAGTTATGGTGTTGTCTGTTCGGCCATTGACACTCATACAGGTGAAAAAGTGGCGATCAAGAAGATTCATGACATCTTCGAGCATATATCGGATGCTGCCCGTATTCTCCGTGAAATAAAGCTGCTTAGGCTTCTACGACATCCCGATATCGTTGAAATCAAACACATCATGCTGCCTCCTTCTAGGAAGGACTTCAAAGATATTTATGTTGTTTTTGAGCTTATGGAGTCTGATCTTCACCAAGTCATCAAAGCCAATGATGACTTAACAAAAGAGCACTATCAGTTTTTCCTTTACCAATTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTTTATCATAGAGATTTGAAGCCAAAGAATATACTAGCAAACGCAAACTGTAAGCTTAAAATTTGTGATTTCGGGTTAGCTAGAGTTGCCTTCAATGACACACCAACTACTATTTTTTGGACGGATTATGTTGCTACAAGGTGGTATAGGGCTCCAGAGCTTTGTGGATCATTTTACTCTAAGTATACACCAGCAATTGATATATGGAGTATCGGTTGCATCTTTGCCGAAGTGCTCACAGGAAAGCCACTCTTTCCTGGGAAAAATGTTGTCCACCAGTTGGATCTGATGACAGATCTGCTTGGGACTCCCTCACTGGATACCGTATCGCGGGTAACTTCTTCCTCGCAATGCATGAAGTCATCTATATTGCACTGTATCTCAGTACAATTCGGAACCAAAGCTTACAAGCTTGCATCAATATTTGAGTTGGATGCAGAGAGATTGCTGGCTTTTGATCCGAAAGACCGACCTACTGCTGAAGAGGCATTGGCCGATCCTTACTTCAAGGGACTGGCTAAAGTTGAGAGAGAACCGTCCTGCCAGCCAATCACGAAAATGGAGTTTGAATTTGAAAGGCGAAGAGTCACGAAGGAGGAAATACGTGAGCTAATTTTCCGCGAGATTCTAGAGTATCATCCTCAATTATTGAAAGACTACATGAATGGAACTGAGAGAACTAATTTTCTTTATCCAAGTGCCGTTGATCAATTCCGAAAGCAGTTTGCCCATTTAGAGGAAAATGGTAAAAATGGACCAGCAATGCCACTTGATAGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTACATTCTAACGCTGCACCCACGAAAGAGCAGACAAGTATTGCTTCCTCCAAAAACCGGCAAACAGCTGAAGAATATAACAAGGGCTCAAGGGATACCGAAATTACAATGCCACGGCCGATGCCAGGTCCCCAAAGAATTCCACTAGCAAAACCTGGTAAAGTTGTTGGACTGGTTGGCCCGTACGAGTATGGGAGTGTTGTCAAGGATTCTTATGATCCAAGGACATTGGTAAGAGGTCCTGTTGTTCCTTCTCAACCTGTTCCCACAGCATATTATTATCAAAGTTCTAGCACTGGACATCGACAGGCAACAGAAGCCGATAAGGGCGTTCCGATGCAGGCAACTCATGGTCAACAACGTGGAGTTAATGCCAAGATAGTGCCGGATATAGCAATCAATATCGACACAAACCCTTTTTTCATGACACGGGTGGGAGTGAACAAGTTAGAACAAGAGGATCAAATTGCCATAGAAACAAGCTTGCTGCAATCTAAGGCTCAGTATGGTGGGATTAGTGCTGCAGCTGGAGCAACTGCCCATAGAAAAGTTGGACCTGTTCAGTATGGTATGACAAGAATGTTCTAA 1833 0.4261 MQQDHRKKNSTEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTVSRVTSSSQCMKSSILHCISVQFGTKAYKLASIFELDAERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPAMPLDRKHVSLPRSTIVHSNAAPTKEQTSIASSKNRQTAEEYNKGSRDTEITMPRPMPGPQRIPLAKPGKVVGLVGPYEYGSVVKDSYDPRTLVRGPVVPSQPVPTAYYYQSSSTGHRQATEADKGVPMQATHGQQRGVNAKIVPDIAINIDTNPFFMTRVGVNKLEQEDQIAIETSLLQSKAQYGGISAAAGATAHRKVGPVQYGMTRMF 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc94g00023 610 CDD STKc_TDY_MAPK 24 360 - -
Stsc94g00023 610 Pfam Protein kinase domain 25 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc94g00023 610 SUPERFAMILY Protein kinase-like (PK-like) 21 319 IPR011009 -
Stsc94g00023 610 MobiDBLite consensus disorder prediction 416 462 - -
Stsc94g00023 610 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Stsc94g00023 610 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 365 - -
Stsc94g00023 610 Gene3D Transferase(Phosphotransferase) domain 1 111 338 - -
Stsc94g00023 610 MobiDBLite consensus disorder prediction 416 438 - -
Stsc94g00023 610 SMART serkin_6 25 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc94g00023 610 ProSiteProfiles Protein kinase domain profile. 25 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc94g00023 610 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Stsc94g00023 610 FunFam Mitogen-activated protein kinase 111 338 - -
Stsc94g00023 610 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Stsc94g00023 610 FunFam Mitogen-activated protein kinase 15 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc94g00023 Stsc-Chr94 110883 115024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc94g00023 1 439 MAP Kinase Gene Family AT2G42880 81.859 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc94g00023 Pkinase 1.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc94g00023 - - gmx:100811788 1047.34