Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc94g00008 ATGTCTAGCAACAATTCTTTAAAGGATGAATTGTCGAAGAGGACTGCATTATTCGGTTTGAGGCTGTGGGTTTTGATTGGGATTGGTGTTGGTGCATTCATACTTCTAATTCTTTGTGTATTACCCGTATGGGTGACATTCCGGAGAAAGTCGAGGAGGTCTCTGGACAAGATCCCCATGTCTCAGATACCAAATGTCTCAAAAGATATCAAGATTGACAAAGTTGGAGTGCCGAATTGTCATGATCTAGCTGAGAGTGTATATATTCCTGTTCATGACAAGGCAAGTGATAATAATTCAGAAAAGTTTTTAGTTCATTTGGGAATGAGCAAATCCAGTGATGCAGATAATATCAGTCAATGCAGCTCGATTTTTCATCACGAGAGAGGGTTTAGCTCGATGTCCGGTGATGAAGTCATCTCTGGTACATTTAAGAAGCAGTCTGCATTGGGGATGGTAACTGCCTCACCTCTAATCGGTTTGCCCGAGGTTTCTCATCTCGGGTGGGGCCACTGGTTTACCCTTAGAGATCTCGAGCTTGCAACCAATCGTTTCTCGGCCGAAAATGTGATCGGTGAGGGTGGATATGGAGTTGTTTACAGGGGAAGGCTAATCAATGGGTCTGAGGTGGCAGTGAAGAGACTTCTTAACAACTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTGGATGCTATAGGCCATGTTAGACATAAAAATCTCGTGCGGCTACTTGGATATTGCATAGAAGGAGTACACAGGTTGCTAGTGTATGAATATGTGAACAATGGTAATTTAGAACAATGGTTACATGGAGCTATGAGCCAACATGGAATACTTACCTGGGAAGCTCGTATGAAGGTTATACTCGGCACAGCCAAAGCGCTTGCTTATTTACATGAAGCAATAGAGCCAAAAGTTGTTCACCGGGATATAAAGTCTAGCAACATATTGATCGATAGCGAGTTCAATGCGAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGACTCAGGGGAAAGTCACATAACCACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAATACCGGCATGTTAAATGAAAAAAGTGACATTTACAGCTTCGGTGTTCTCTTGCTGGAAGTGGTGACCGGAAGGGACCCGGTCGACTATTCCCGTTCTGCGAATGAGGTGAATCTTGTTGAGTGGCTCAAGATGATGGTGGGAACAAGGAGAGCCGAGGAAGTAGTGGACTCCAGCCTCGAAGTGAAACCGTCAATGCGTCTTCTTAAGCGTGCCCTTCTGGTTGCGCTTAGATGTGTCGATCCTGATTTTGAGAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCCGATGAGTATCCGTTCCGAGAGGATCGAAGAACTAGAAAGAGCCGCACCGCCAGCATGGAAATCGAATCTGTGAAGGATGATTCCGGTCCATCCGATGCCGAAAAGATGAAGGATCTTGAAAACAAAGTCCAAGAGACATCCCAACAATAG 1524 0.4449 MSSNNSLKDELSKRTALFGLRLWVLIGIGVGAFILLILCVLPVWVTFRRKSRRSLDKIPMSQIPNVSKDIKIDKVGVPNCHDLAESVYIPVHDKASDNNSEKFLVHLGMSKSSDADNISQCSSIFHHERGFSSMSGDEVISGTFKKQSALGMVTASPLIGLPEVSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYRGRLINGSEVAVKRLLNNLGQAEKEFRVEVDAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGAMSQHGILTWEARMKVILGTAKALAYLHEAIEPKVVHRDIKSSNILIDSEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNEKSDIYSFGVLLLEVVTGRDPVDYSRSANEVNLVEWLKMMVGTRRAEEVVDSSLEVKPSMRLLKRALLVALRCVDPDFEKRPKMSQVVRMLEADEYPFREDRRTRKSRTASMEIESVKDDSGPSDAEKMKDLENKVQETSQQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc94g00008 507 FunFam Putative receptor-like serine/threonine-protein kinase 261 471 - -
Stsc94g00008 507 ProSiteProfiles Protein kinase domain profile. 185 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc94g00008 507 CDD STKc_IRAK 191 457 - -
Stsc94g00008 507 PANTHER OS01G0323000 PROTEIN 1 481 - -
Stsc94g00008 507 Gene3D Transferase(Phosphotransferase) domain 1 261 474 - -
Stsc94g00008 507 Coils Coil 205 225 - -
Stsc94g00008 507 SMART serkin_6 185 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc94g00008 507 SUPERFAMILY Protein kinase-like (PK-like) 169 461 IPR011009 -
Stsc94g00008 507 MobiDBLite consensus disorder prediction 463 507 - -
Stsc94g00008 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Stsc94g00008 507 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Stsc94g00008 507 MobiDBLite consensus disorder prediction 463 500 - -
Stsc94g00008 507 Gene3D Phosphorylase Kinase; domain 1 165 260 - -
Stsc94g00008 507 FunFam Putative receptor-like protein kinase 167 260 - -
Stsc94g00008 507 Pfam Protein kinase domain 187 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc94g00008 Stsc-Chr94 42696 46391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc94g00008 143 459 Trihelix Transcription Factor Family AT1G70460 47.516 5.07e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Stsc94g00008 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc94g00008 - - gmx:100813931 844.728