Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc94g00002 ATGTTCCTTGTTCTTCAGCTCTCTCCACATGGCAGCTTATCTTCCATACTTTATGGGCCTAGAGAGAAGCTGAATTGGATTCTGAGATTTGAGATTATCTTGGGAACTGCTGAGGGACTTTGCTATCTCCATGAAGGATGTCAGAGAAGCATCATTCACAAGGATATCAAGGCTTCTAACATTCTTCTCTCTGAGACTTTGAGCCTCAGATATCTGATTTTGGCCTAG 228 0.4254 MFLVLQLSPHGSLSSILYGPREKLNWILRFEIILGTAEGLCYLHEGCQRSIIHKDIKASNILLSETLSLRYLILA 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc94g00002 75 SUPERFAMILY Protein kinase-like (PK-like) 2 67 IPR011009 -
Stsc94g00002 75 Gene3D Transferase(Phosphotransferase) domain 1 1 71 - -
Stsc94g00002 75 ProSiteProfiles Protein kinase domain profile. 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc94g00002 75 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Stsc94g00002 75 PANTHER OS08G0249100 PROTEIN 1 65 IPR046958 -
Stsc94g00002 75 Pfam Protein tyrosine and serine/threonine kinase 2 67 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc94g00002 Stsc-Chr94 2975 3374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc94g00002 1 70 Receptor kinase-like Gene Family AT2G37710 47.887 6.63e-16 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc94g00002 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc94g00002 - - gmx:100776081 119.783