Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc94580g00001 ATGTCCTCATTAGCAAGAGGCAATCCTCAACTTCAACGCAAGCTCCCTGCATTTCGTGTATGCCATAGAGGAGTTAAAATGTCAAGTGCTGAGGAAGTGGGCACAGAAAGTTCATGGAGAAAAAAGGATACTGTGTTAAGTGCCGAAGTTAAAACAGCCCGGGAATCTCTTAAATCAGGTTTTTCGGAGCTACGAGCATTGATCAATGATCCTCTTCCTGAGGCATTGGATATATCTGATGCTGTTAGATCTAAACTTGCACAGAAAGGTACAAATCGCGAACAACCCATGGAAAACCAGAGTGGAGATATAGATGTACCAAACTCAAATACTTGCAGGACTATTGTTCTTTATGAAGCTAAAGATGCTGATCATGAGAAGTCGTCTTCTGTTCGTCATAGTAGATTTAAAGTTGAACCTCCCAATTTAATGGAGCAGAACAATACTGCTCGTGAAAGTCGCAGGTTTATGAAGCCGAATGGTACTGCTCATACTTATGAGTGGGATGATTCAATAGATAACATGCCCGTCGGAGTGCAACTAAGAAGGAAGAAAAGAAAATGGTCTTCATTGGAAGAAGAGACACTAAGAACTGGTGTAGAAATGTTTGGCGTCGGAAACTGGAAAACAATTCGAAGTTTTTACAGCGACATATTTGAACATAGACTAGCAGTTGACTTGAAGGACAAGTGGAGGAACATGACGCGGTACTGA 714 0.4146 MSSLARGNPQLQRKLPAFRVCHRGVKMSSAEEVGTESSWRKKDTVLSAEVKTARESLKSGFSELRALINDPLPEALDISDAVRSKLAQKGTNREQPMENQSGDIDVPNSNTCRTIVLYEAKDADHEKSSSVRHSRFKVEPPNLMEQNNTARESRRFMKPNGTAHTYEWDDSIDNMPVGVQLRRKKRKWSSLEEETLRTGVEMFGVGNWKTIRSFYSDIFEHRLAVDLKDKWRNMTRY 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc94580g00001 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 182 237 IPR017930 -
Stsc94580g00001 237 CDD SANT_TRF 186 236 - -
Stsc94580g00001 237 ProSiteProfiles Myb-like domain profile. 180 235 IPR001005 -
Stsc94580g00001 237 SUPERFAMILY Homeodomain-like 182 236 IPR009057 -
Stsc94580g00001 237 PANTHER MYB TRANSCRIPTION FACTOR 19 237 - -
Stsc94580g00001 237 Pfam Myb-like DNA-binding domain 185 234 IPR001005 -
Stsc94580g00001 237 SMART sant 184 237 IPR001005 -
Stsc94580g00001 237 MobiDBLite consensus disorder prediction 88 108 - -
Stsc94580g00001 237 Gene3D - 188 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc94580g00001 Stsc-Chr94580 610 2757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc94580g00001 185 235 Single Myb Histone (SMH) Gene Family AT3G49850 50.943 2.68e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc94580g00001 Myb_DNA-binding 7.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc94580g00001 - - adu:107473962 332.413