Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc94480g00001 CTATGCACCTTGATCTCATTGCAGAGGTACACCAAGGCTTTGACAAATTTGCAAAGGACTGAGTTAGTTAAAAATTCAAGGCAAGAGCCCAATGAAAGGAAAAGAGCATTGACTGATTCCTTAAGAAACAGCCGGTATGCCAATGAGCCTATGCTTAAGTCTTGTAGGATTACCATTGATAATAATTTTACTCGAGTTGACGGCCGAATTCTGCAACCTCCAAGACTTGTAGTTGGAAATGGGGAGGAGTTCATTCCAAGGGATGGGCGCTGGAATTTCAACAATAAGGAACTAGTTAGGCCTGTGAGTCTTGAGCGTTGGGCTGTTGTAAACTTCTCAGCTCGCTGTGACATGGAACATCTGTTCAAAACCATCAGGAAATGTGCTGAAATGAAGGGAATTCGCATAAAGCCTCCATTACAAGTATTCGAAGAGGATGATCGTGCAAAACGTGATCCGGCGCCTGTAAGGGTTGAAAAGATGTATGATCGTGTAAAGTCCAAGTTGCATGGCCCCCCTCAACTTCTTTTGTGCATTCTTCCAGAGAGAAAGAATTCTGAAATTTATGGTAGGATCAACAAGTCTCATCTCATTTGTATAGTAGCTAAGCAGCATAATCTTTTAGTTTTGTTGATACTCACTATACAATTAATGTAA 657 0.4125 LCTLISLQRYTKALTNLQRTELVKNSRQEPNERKRALTDSLRNSRYANEPMLKSCRITIDNNFTRVDGRILQPPRLVVGNGEEFIPRDGRWNFNNKELVRPVSLERWAVVNFSARCDMEHLFKTIRKCAEMKGIRIKPPLQVFEEDDRAKRDPAPVRVEKMYDRVKSKLHGPPQLLLCILPERKNSEIYGRINKSHLICIVAKQHNLLVLLILTIQLM 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc94480g00001 218 Gene3D - 70 207 - -
Stsc94480g00001 218 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 201 - -
Stsc94480g00001 218 SUPERFAMILY PAZ domain 1 46 IPR036085 GO:0005515
Stsc94480g00001 218 SUPERFAMILY Ribonuclease H-like 66 194 IPR012337 -
Stsc94480g00001 218 Pfam Argonaute linker 2 domain 32 76 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc94480g00001 Stsc-Chr94480 162 1172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc94480g00001 2 194 Eukaryotic Initiation Factors Gene Family AT5G43810 28.079 7.72e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc94480g00001 K11593 - qsa:O6P43_029783 262.307