Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc94365g00002 ATGGCTGGCTTGGCACCAGAAGGATCACAATTTGATGCTCGTCAATTTGATGCTAAGATGAATGAGTTACTTCGGGCTAATGCGGAGGACTTCTTCACATCTTATGATGAAGTTTATGATACCTTTGATGCTGTGGGATTGCAAGAAAACCTTCTAAGGGGGTATTTATGCATATGGGGGATTGTGCCTTTCATCAAGGGACTTGATGTGATTCAGCAAGCACAATCTGGAACTGGAAAAACTGCTACTTATTGCTCTAATATTTTGCAGGAGCTTGATTACACCTTAGTTGAATGCCAGGCTCTAGTTCTTGCTCCCACTCGTGAACTTGCACAACAAATTGAGAAGGTCATGAGAGCACTAGGTGACTATCTTGGGGTTAAGGTTCATACTTGTGTGGGTGACACCCTTGTTCGTGAAGACAAGCGGATCCTCGAAAGCAGGGTTCATATTGTAGTTGGTATGCTGGAAATGTTGATGGACACTGAACTTGATGAAAACCAGATGGATTATGCCCAAACTGCCCATAAGAGTGGTAAGGATGTTATATCAGTGATCAGTGAGGTTCTTGATCAGGCTAAGATTGAGGCAGGAAAGCTTGAACTTGAAGCTGTGGCTTTTGATCCACATGCTATTCTAGAGGAAGTTATATCAGTTTTCTCAGGAAAGTCTAAAGAAAAAGAAATTGAG 690 0.4217 MAGLAPEGSQFDARQFDAKMNELLRANAEDFFTSYDEVYDTFDAVGLQENLLRGYLCIWGIVPFIKGLDVIQQAQSGTGKTATYCSNILQELDYTLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHTCVGDTLVREDKRILESRVHIVVGMLEMLMDTELDENQMDYAQTAHKSGKDVISVISEVLDQAKIEAGKLELEAVAFDPHAILEEVISVFSGKSKEKEIE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc94365g00002 230 Gene3D - 33 189 IPR027417 -
Stsc94365g00002 230 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 61 208 IPR014001 -
Stsc94365g00002 230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 162 IPR027417 -
Stsc94365g00002 230 PANTHER TWO-COMPONENT HISTIDINE KINASE 152 230 - -
Stsc94365g00002 230 SMART ultradead3 48 230 IPR014001 -
Stsc94365g00002 230 Pfam DEAD/DEAH box helicase 64 169 IPR011545 GO:0003676|GO:0005524
Stsc94365g00002 230 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 151 199 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc94365g00002 Stsc-Chr94365 1174 2443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc94365g00002 1 161 Eukaryotic Initiation Factors Gene Family AT3G13920 69.006 8.11e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc94365g00002 K03257 - csin:114262399 251.521