Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc940g00001 ATGGCCACCGTTCAAGGATGGGGAGACATCACCTCCCTCTCCCTCCAAGTCATCACCGGCCGCTGGTTCCTCGTCTTCGCCTCCTTCCTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGCCTCTACTCCAACGACATCAAAAGCACCCTCGGCTACGACCAAACCACCCTCAACCTCCTCAGTTTCTTCAAGGACTTCGGCAGCAACGTCGGCGTCCTCTCCGGCCTCATCAACGAGCTAACCCCACCCTGGGTCGTTCTCGCCATCGGCGCCATCCTCAACTTCTTCGGCTACCTCATGATCTGGCTCTCCGTCACCAAAAGAATCGCCACACCAAAAGTCTGGCAAATGTGCTTGTACATTNNNNNNNNNNCTCAGTCCTTCGCCAACACCGGCTCTCTCGTCACCTGCGTCAAGAACTTTCCAGAAAGCCGCGGCGTCGTTTTGGGAATCTTGAAAGGCTACGTCGGACTCAGCGGAGCAATCATCACTCAATTATACTCCGCCATTTACTACGACGACACCAAGGCTTTAATTCTTTTCATCGGTTGGCTTCCCGCCGCCATCTCCTTCGCTTTCCTCCGCACCATCCGCTATATGAAGCCCGTTCGCCAGCCTAATGAGCTTAAAGTCTTCTTTAACTTCCTTTACATCTCTCTTGGCCTCGCTGGGTTTCTTCTCGTCATGATCGTTGTTCAGAAGAGAGTCAACTTCACTCAGAGCGAGTTCGGTATAACGGCTGCTGTTGTTCTTGTCTTACTCTTTCTCCCTCTAGCAATTGTTGTTTTGGAAGAGATCAAGATCTGGGAGGCCAAGAAGCTCGCCTTGGTTGACCCTTCTCCGGTGAAGATCGTCACCGATGGTCAAAAGGTTAACCCCGAGGAAGTTAAGAAACAAACGGAAACCAACACCAGCAACAACCTCTCATCCCAATTAGTACAAGAAGCGGAAGAAACTAGATGGTGGCAGAATGTGTTTAATCCACCGGCACGAGGTGAAGATTACACTATACTCCAAGCACTCTTCAGCATTGACATGCTAATACTGTTCATTGCTTGCATTTCTGGGATTGGAGGAACGTTGACCGCGATTGACAACCTTGGTCAAATAGGAACCGCTCTCAAATACCCAAAGAAAAGCATAAGCACGTTTGTGTCACTAGTGAGTATTTGGAACTACCTGGGGCGTGTTTTCTCCGGGTTCGTTTCAGAGCATTTTTTGCAGAAATACAAATTCCCAAGGACTCTAATGTTGACTTTGACTTTGTTGCTGTCATGTATTGGTCACCTTCTCATAGCATTCGACGTCAAGGATGGTCTCTACATAGCTTCTGTGATAATTGGCTTTAGCTTTGGTGCGCAATGGCCTTTGCTTTTTGCCATAATCTCGGAGCTGTTTGGTCTCAAATACTATGCAACTTTGTATAACTTTGGAAGCGTGGCGAGTCCTCTTGGGTTGTATGTTCTGAACGTCAGAATCACTGGTCATTTGTATGACAAAGAAGCCAAGAGGCAGTTGGCGGCGTTGGGGATAAAGAGAAAAGCAGGGGAAGAATTGAGTTGTATTGGTGTCAAGTGTTTCAGATTGTCTTTCATTATTATTACTGCTGCTACTTTCTTTGGCGCCATTGTTTCTCTCTTTTTAGTGGCAAGGACTAGGGAGTTTTACAAGGGGGATATTTACAAGAGGTACCGGGACCAGGCGGCGGCCGCAGACGGGACCGAATTGGCCGTGGTGGAGGAGAACGGTGGTGGTGGGAAGACAGGGCATCAAGATAACAATGCCAAAGAAGATGGTGAGCAAGTGGAGAGATCTAATTAG 1827 0.4849 MATVQGWGDITSLSLQVITGRWFLVFASFLIMAAAGATYMFGLYSNDIKSTLGYDQTTLNLLSFFKDFGSNVGVLSGLINELTPPWVVLAIGAILNFFGYLMIWLSVTKRIATPKVWQMCLYIXXXXQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFAFLRTIRYMKPVRQPNELKVFFNFLYISLGLAGFLLVMIVVQKRVNFTQSEFGITAAVVLVLLFLPLAIVVLEEIKIWEAKKLALVDPSPVKIVTDGQKVNPEEVKKQTETNTSNNLSSQLVQEAEETRWWQNVFNPPARGEDYTILQALFSIDMLILFIACISGIGGTLTAIDNLGQIGTALKYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLQKYKFPRTLMLTLTLLLSCIGHLLIAFDVKDGLYIASVIIGFSFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVRITGHLYDKEAKRQLAALGIKRKAGEELSCIGVKCFRLSFIIITAATFFGAIVSLFLVARTREFYKGDIYKRYRDQAAAADGTELAVVEENGGGGKTGHQDNNAKEDGEQVERSN 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc940g00001 608 Gene3D MFS general substrate transporter like domains 339 559 IPR036259 -
Stsc940g00001 608 MobiDBLite consensus disorder prediction 582 608 - -
Stsc940g00001 608 SUPERFAMILY MFS general substrate transporter 20 556 IPR036259 -
Stsc940g00001 608 CDD MFS_Mch1p_like 20 544 - -
Stsc940g00001 608 MobiDBLite consensus disorder prediction 593 608 - -
Stsc940g00001 608 Pfam Nodulin-like 21 264 IPR010658 -
Stsc940g00001 608 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 22 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc940g00001 Stsc-Chr940 992 3081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc940g00001 1 569 Nodulin-like Gene Family AT2G39210 68.476 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc940g00001 - - gmx:100776865 912.138