Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc94035g00001 ATGAACGCATTTGAGTACATAAGTGTAGATTCAAGGTTCAATGATGTTTTCAACAAAGCTATGCTAAACCATACAACCATAGTGATGAAGAGAGTTCTTGAGTGCTATGAAGGTTTCAACAACATTAACACACTTGTTGATGTTGGTGGTGGTCTTGGCATCAATCTCAAAATGATCACTTCCAAATATCCTAATATCAATGCTATTAACTTTGACTTGCCTCATGTTATTGAACATGCCCCCAACTATGCCGGTTTGAAACATGTGAGAGGAGATATGTTTGAGAGTGTTCCCAATGGAGATGCCATTTTCATGAAGTTTATACTTCATGATTGGAGTGATGAACAATGCGTGAAGGTGTTGAAGAATTGCTACAAGGCCATCCCTGGAGATGGAAAAGTGATAGTTGTAGACACAATGGTTCCGATTTTGCCGGAGAATACAACAGCTGCTAAGACTGCTTTCAAAACTGACTTACATATGATGACTCAAAACATTGGAGGAAAAGAGAGAACAAAACATGAGTTCATTCAATTGGCCAATGCTTCTGGATTTTCTGCCATCAAATTTGTGTGCTCTGTTTCTGGATTTTGTGTTATGGAGTTCTACAAGTAG 615 0.3837 MNAFEYISVDSRFNDVFNKAMLNHTTIVMKRVLECYEGFNNINTLVDVGGGLGINLKMITSKYPNINAINFDLPHVIEHAPNYAGLKHVRGDMFESVPNGDAIFMKFILHDWSDEQCVKVLKNCYKAIPGDGKVIVVDTMVPILPENTTAAKTAFKTDLHMMTQNIGGKERTKHEFIQLANASGFSAIKFVCSVSGFCVMEFYK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc94035g00001 204 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 204 IPR016461 GO:0008168
Stsc94035g00001 204 PANTHER O-METHYLTRANSFERASE 3 202 IPR016461 GO:0008168
Stsc94035g00001 204 Pfam O-methyltransferase domain 2 186 IPR001077 GO:0008171
Stsc94035g00001 204 Gene3D Vaccinia Virus protein VP39 1 204 IPR029063 -
Stsc94035g00001 204 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 202 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc94035g00001 Stsc-Chr94035 802 3145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc94035g00001 1 204 Monolignol Biosynthesis Gene Families AT5G54160 57.843 5.33e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc94035g00001 K13066 - gmx:100789402 330.102