Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93g00009 ATGAATAAATCCATCAATTTCGCTTCAATTTTCTTACTCTTCACACTCTCTTCTCATCAATTTCTTCTTCACGTTGCTTCATCCAATTCACCCATACGCTCGAACCAGGGATTTGCAGATGAAAGAACTCTCAAATCGGAACAAGAGCATGTTCATGAAGTGCATTGCTCTAGAGAAAGGAGCAGGGCAGCTAGGAAAGTGATAGAGGAGTATTTGACACCATTTTTGGAGAAAGAAAAGTATCAGCTTTCAAGCAAGTGCAGACTTCACCCTGAAAATGATATGTTCAGGGATCAAGAGGAGCATAAAATTTGCCTAGGCTTTCATGACTGGCAGTGTGGATATTGTAAGAAAAGCTTCCAAGAAGAAAAGTTTCTTGATCAGCATTTTGATAACAGACACTCCAATCTTCTCAATTCAAGTGATGGTAGGTGCTTAGCTGATTTATGTGGGGCATTGCATTGTGATACTGTGATGAGTTCGAAGTCCTCTAGAAACAAGTGTAATCCAGCTGCTGCCACTAGGAATAAACACCTATGTGAGAGTCTTGCTGAGAGTTGTTTTCCTGTGAGTGATGGTCCATCTGCAAGTCGTCTTCACGAAATATTTTTGCACCAATTTTGTGAGGCCCATACCTGCTCAGGGAAACAGAAACCCTTCTCTAGAGGAGGCAAGGTACAAAAAAGCTTGTTCGTCATAGTTTCTGGAGCATTGATCTTGGTTATACTTCCTTTGTTCTATCTTTTTCTTTATCTGGTACAAAGAGATATGAAGAGTAGTACTCAAGAACTTCGCCGCATCTCAAAAATGGGACGGAAAACAAAGCCATCATGA 834 0.4065 MNKSINFASIFLLFTLSSHQFLLHVASSNSPIRSNQGFADERTLKSEQEHVHEVHCSRERSRAARKVIEEYLTPFLEKEKYQLSSKCRLHPENDMFRDQEEHKICLGFHDWQCGYCKKSFQEEKFLDQHFDNRHSNLLNSSDGRCLADLCGALHCDTVMSSKSSRNKCNPAAATRNKHLCESLAESCFPVSDGPSASRLHEIFLHQFCEAHTCSGKQKPFSRGGKVQKSLFVIVSGALILVILPLFYLFLYLVQRDMKSSTQELRRISKMGRKTKPS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93g00009 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 136 IPR013087 -
Stsc93g00009 277 ProSitePatterns Zinc finger C2H2 type domain signature. 113 134 IPR013087 -
Stsc93g00009 277 PANTHER ZINC FINGER PROTEIN-RELATED 2 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93g00009 Stsc-Chr93 58656 61695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93g00009 35 277 C2H2 Transcription Factor Family AT5G63280 59.274 3.68e-105 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93g00009 - - lang:109362398 399.053