Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93900g00001 ATGGAAGCATCAGAAGCTGAATTTGAGCATCCTAGAAAGGCATTTGGATGGGCAGCAAGAGATTCTTCAGGATTGCTCTCCCCTTTCAATTTCTCTAGAAGGCATGAAGTGGTTGGCATAGTTGAAGAGGTGGGAAGTAATGTACGAAAGTTCAAGGTCGGAGACAAAGTGGGCGTGGGATACTTTGTAGAATCTTGTCGCTCCTGCCAAAATTGTATTGATAATCTTGAAAATTACTGTTCTAAAAGCATTTTAACACAAGTTGGCAAACACATTGATGGAACCACCACCTATGGAGGCTACTCTGATTCAATGGTTGTTGATGAACACTTTGTGATTAGAATTCCTGAAGGGCTACCTCTTGATGCTGCTGCTCCTCTTCTTTGTGCTGGGGTAACAGTATATAGCCCTATGAAATATTATGGGCTTGATAAGCCTGGTTTGCATGTGGGTGTTGTTGGGCTTGATGGGCTTGGCCATATGGCAGTCAAGTTTGCCAAAGCCCATGGGCTCAAGGTCACTGTCATTAGTACTTCACCCAACAAAAAAGAGGAAGCAATAATGAATTTGGGAGCTGATTCATTTTTGGTTAGTCGTGATCCAGACCAAATGGAGG 616 0.4318 MEASEAEFEHPRKAFGWAARDSSGLLSPFNFSRRHEVVGIVEEVGSNVRKFKVGDKVGVGYFVESCRSCQNCIDNLENYCSKSILTQVGKHIDGTTTYGGYSDSMVVDEHFVIRIPEGLPLDAAAPLLCAGVTVYSPMKYYGLDKPGLHVGVVGLDGLGHMAVKFAKAHGLKVTVISTSPNKKEEAIMNLGADSFLVSRDPDQME 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93900g00001 205 PANTHER ALDEHYDE REDUCTASE 35 205 IPR047109 GO:0016616
Stsc93900g00001 205 CDD CAD1 15 205 IPR047109 GO:0016616
Stsc93900g00001 205 Pfam Alcohol dehydrogenase GroES-like domain 32 114 IPR013154 -
Stsc93900g00001 205 Gene3D - 34 129 - -
Stsc93900g00001 205 Gene3D - 130 205 - -
Stsc93900g00001 205 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 119 204 IPR036291 -
Stsc93900g00001 205 SUPERFAMILY GroES-like 30 147 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93900g00001 Stsc-Chr93900 836 2452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93900g00001 12 205 Monolignol Biosynthesis Gene Families AT4G37980 58.621 8.62e-84 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93900g00001 K23232 - gmx:100816901 303.523