Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93848g00001 ATGGAGTTATCCGAAGACATGAATCCTGTTCATCACAATAATGAGCAAGACCAACAGCAGAAACAAAAGGATTCCAAGCTTGCCATCTCGGTGTTAGAAGGCTTCAAATTTCACCCTCAAGATCATCAGAATTTGAATCAATTAGTTGGATGTGTTAATGACAAGCAGATTCCATCACCATTGGAGCTCTTGAGTAACTATGCAAGTAGTTTCATTAGGTTAAGTGGCAGAAACTTATTAAGAGAACAAAACAAGGACGTTGAGCTCGCTCAATTTCTTTTTGCTGCTGTTGAGAGGATAGTGTGCCGCCAATTCGAACAGGCAAATTCGTTGCTCCTTCATTGTTGCCAGTGGAATAATAATAATAATTCACCAAGCTATGGAAACTCAGTTCAGAGGACAATCTTCCATTTCTCTCAAGCACTTAGTGAAAGGATCAAAAAAGAAATAGGATCAGGGATGGTAACGATAAGGAGACTACAGAACAGGAACCCGATTGAAGAGTTGCAAAGGGATCACAATGCTGCGGTTACATGCCATCAAAAGCTTCCTTTCAATCAAGTGATGCAATTCGTTGGTGTGCAAACTGTTATAGAGTATGTTTCATCACAAAACAAAATACATATGATTGATCTCGCTCTTGGATACGGGTTGATGGCGGCAACTATCATGGAAGCTCTGGCCGAGCGCGAGGAGAGCCCGGTCGAGCTTCTCAAGATAACTGCTGTCGTGTATGGAGACAGCAGGGGAGTGATAGATGACACCGGATCAAGGTTGGTGAGTTTGGGTGAGTCATTGAACTTGTCCTTTTTGTTTAAGATTGTTTTTGTTAGAGACATCAATGAACTAGACAAGGATGATTTCGAAATAGAAAAGGATGAAGCTGTGGTTGTGTATTCTCCCAATTTCCTATGGACTTTGGTGTCATTCCCAGATTCCTTGGACAAGTTGATGAGAGTGATAAAGAAGATCAAACCGGGTTTAATGACTGTGCATTGTTAG 1002 0.4132 MELSEDMNPVHHNNEQDQQQKQKDSKLAISVLEGFKFHPQDHQNLNQLVGCVNDKQIPSPLELLSNYASSFIRLSGRNLLREQNKDVELAQFLFAAVERIVCRQFEQANSLLLHCCQWNNNNNSPSYGNSVQRTIFHFSQALSERIKKEIGSGMVTIRRLQNRNPIEELQRDHNAAVTCHQKLPFNQVMQFVGVQTVIEYVSSQNKIHMIDLALGYGLMAATIMEALAEREESPVELLKITAVVYGDSRGVIDDTGSRLVSLGESLNLSFLFKIVFVRDINELDKDDFEIEKDEAVVVYSPNFLWTLVSFPDSLDKLMRVIKKIKPGLMTVHC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93848g00001 333 ProSiteProfiles GRAS family profile. 80 333 IPR005202 -
Stsc93848g00001 333 MobiDBLite consensus disorder prediction 1 23 - -
Stsc93848g00001 333 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 68 331 IPR005202 -
Stsc93848g00001 333 MobiDBLite consensus disorder prediction 1 22 - -
Stsc93848g00001 333 Pfam GRAS domain family 91 331 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93848g00001 Stsc-Chr93848 2625 3750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93848g00001 79 331 GRAS Transcription Factor Family AT1G66350 24.803 4.28e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc93848g00001 GRAS 1.6e-34 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93848g00001 - - aip:107615215 283.108