Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93504g00001 ATGATTGAGAAAGGACTATCTCATTGGTTTTATTTCTATATGGGAAGGGCTCCCTGTTGTGACAAGGTGGGACTCAACAAAGGCCGCTGGACACAGGAGGAGGATCAAATCTTGACAAACTACATTTGTGCCAATGGAGAAGGTTCTTGGAGGTCTTTGCCAAAGAATGCTGGGTTACTAAGATGTGGGAAGAGTTGCAGATTGAGATGGATCAACTATTTGAGAGCTGATCTCAAAAGAGGAAACATCTCCACCGAAGAGGAAGCCATCATCACAAAGTTGCATGCTTCTTTTGGCAACAACATGTTGTAG 312 0.4359 MIEKGLSHWFYFYMGRAPCCDKVGLNKGRWTQEEDQILTNYICANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISTEEEAIITKLHASFGNNML 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93504g00001 103 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Stsc93504g00001 103 SMART sant 26 76 IPR001005 -
Stsc93504g00001 103 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 14 100 - -
Stsc93504g00001 103 FunFam Myb transcription factor 24 80 - -
Stsc93504g00001 103 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Stsc93504g00001 103 SUPERFAMILY Homeodomain-like 28 101 IPR009057 -
Stsc93504g00001 103 Gene3D - 24 80 - -
Stsc93504g00001 103 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 78 IPR017930 -
Stsc93504g00001 103 CDD SANT 29 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93504g00001 Stsc-Chr93504 240 1507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93504g00001 14 100 MYB Transcription Factor Family AT2G47460 78.161 3.24e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc93504g00001 Myb_DNA-binding 5.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93504g00001 K09422 - mnt:21385492 165.236