Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93394g00001 ATGGTGAAGCCCAAGCCAACAACAAAATTCCCTTCCTTTCATCTACTACTCCTAATAACACTACTTGCTTCCTTATTCTTATTCCAAAGCTCACTCTCTTCTTTCTCTTTCTCTTTCTCACTCTTCACTCTCTTCCTCTTCGCTCTTTCCCTTAACTACTGGCTTGTCCCCGGAGGCTTTGCATGGCGGAACCACCACCACCACCACAACAACAACGTAAAAATCTCTGGTCCCATGGGGTGGCCCTTGCTGGGTTCTTTACCTCAAATGGGTTCCCTTGCACATGCAAAACTCGCTTCCATGGCTACAAACATGAATTCAAAGAGGCTCATGGCGTTGAGTCTTGGTTCCACACCTGTTATCATAAGCAGCCACCCTGAAACCGCAAGAGAGATTCTCTTCGGTTCTTCATTCGCCGATCGACCAATCAAAGCTTCAGCCAAAACCCTAATGTTCGAGCGCGCCATTGGTTTCGCCCCTTCCGGAACCTACTGGCGCCACCTCAGAAGAATAGCCGCTTTCCACATGTTCTCTCCTAAAAATATCCAGAGCTTGGAGAATCTGCGGCAACGCATAGCTTCGGAGATGGAGGTGAAAGCAATGAGGATAATGGAAGAGAAAGGGTTCGTTGAAATTCGTAGTGTGTTTCAGGAGGGTTCTCTGAGCAATATTCTGGAGAGCGTGTTTGGTTCTTCTTCTAGCTCTGAGTTGGGGGATATGGTAAAGGAAGGGTACGAGTTAATCGGCATGTTTAACTTGGAAGATTATTTTCCATTGTTGAAGTTGTTGGATTTTCATGGTGTGAAGAGAAGGTGTCACAAATTAGCCAGTAAAGTTAAAAGTGTGGTGGGTAACATTGTGGATCAAAGAAAAAAGTGCCCGCAACACTTGCTTCCCAACAATAATGATTTTCTCACCACTTTGCTTTTACTCCCTAAGGAGGAAAGCTTAGCCCATTCGGATATGGTCGCTATTCTTTGGGAAATGATATTTAGAGGAACAGATACAGTGGCAATATTACTGGAATGGATCATGGCAAGAATTGTACTGCACCAGGACATACAAATGAAAGTCCGCCAAGAGATTGACGCGTGTGTTGGTGAAAATGGTCACGTGCGAGACTCCAACATTCCCAACCTCCCTTACCTTCAGGCAATAGTCAAAGAAGTACTCCGCTTGCACCCGCCCGGCCCATTGCTATCATGGGCCCGCTTAGCCGTCCATGATGTCCACGTGGATAAAGTCTTTGTGCCAGCTGGCACAACTGCAATGGTTAACATGTGGGCTATATCACATGACTCGGCCATATGGGAGGACCCGTGGGCTTTCAAGCCCGAAAGGTTCTTGAAGGGAGATGTATCCATTATGGGCTCGGACTTGAGGCTGGCACCATTTGGCGCAGGGCGTAGGGTGTGCCCGGGGAGAGGGTTGGGCTTAGCCACTGTCCATATCTGGCTTGCACGGCTTCTCCACCATTTCGTGTGGCTTCCCGCGGAACAATCTGTTGATCTCTCCGAAAATCTCAGGCTTTCTATGGAGATGAAGACACCTTTACGTTGCCGAGTAGTTCATAGACATAACTACGTAAGCCCTTAA 1596 0.4749 MVKPKPTTKFPSFHLLLLITLLASLFLFQSSLSSFSFSFSLFTLFLFALSLNYWLVPGGFAWRNHHHHHNNNVKISGPMGWPLLGSLPQMGSLAHAKLASMATNMNSKRLMALSLGSTPVIISSHPETAREILFGSSFADRPIKASAKTLMFERAIGFAPSGTYWRHLRRIAAFHMFSPKNIQSLENLRQRIASEMEVKAMRIMEEKGFVEIRSVFQEGSLSNILESVFGSSSSSELGDMVKEGYELIGMFNLEDYFPLLKLLDFHGVKRRCHKLASKVKSVVGNIVDQRKKCPQHLLPNNNDFLTTLLLLPKEESLAHSDMVAILWEMIFRGTDTVAILLEWIMARIVLHQDIQMKVRQEIDACVGENGHVRDSNIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAISHDSAIWEDPWAFKPERFLKGDVSIMGSDLRLAPFGAGRRVCPGRGLGLATVHIWLARLLHHFVWLPAEQSVDLSENLRLSMEMKTPLRCRVVHRHNYVSP 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93394g00001 531 Gene3D Cytochrome P450 61 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PANTHER CYTOCHROME P450 78A7-RELATED 27 525 - -
Stsc93394g00001 531 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Stsc93394g00001 531 FunFam Cytochrome P450 78A5 67 525 - -
Stsc93394g00001 531 Pfam Cytochrome P450 77 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93394g00001 531 SUPERFAMILY Cytochrome P450 77 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93394g00001 Stsc-Chr93394 2490 4631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93394g00001 35 526 Cytochrome P450 AT1G13710 51.569 9.35e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93394g00001 - - gmx:100817944 715.301