Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93265g00001 ATGCTTGATACCCAAGGGTACCTTGTGTTGTTCCTTCTATGGTTCATCTCCACCTTTTTAATCAAATCTTTATTCACAAAGTCCCGAAGTCTTAAACTCCCACCAGGTCCCCCAATTTCCTTGCCACTTCTCGGTCACGCGCCTTACCTCCGGTCCCTCCTTCACCAAGCTTTATACAAGCTATCACTGCGCTATGGACCCCTTATTCACGTTCTCATTGGTTCCAAGCACGTTGTGGTTGCTTCCTCAGCAGAAATGGCGAAGCAGATTCTTAAGACTAACGAGGAATCCTTCTGCAACCGTCCGATCATGATCGCCAGCGAGAGTTTGACGTATGGCGCAGCAGACTACTTCTTCATTCCGTACGGAACATACTGGAGGTTCCTTAAGAAGCTCTGCATGACGGAGCTTCTTAGCGGGAAAACCCTAGATCACTTCGTCGGCATTCGCCAGGACGAAGTGGAGGCATTTCTAAGGAATATTCTAGAAATCTCAAAGAGCGGAAAGGCGATCGAGATGAGGCAGGAGTTGATAAGGCACACGAACAACATAATCTCGAGGATGACGATGGGGAAGAAGAGCATCAGAAACGACGACGAGGTTGCGAGGTTGAGGAAGGTGATCAGGGAAGTTGGGGAGCTTCTTGGGGCGTTTAATTTGGGGGATATAATTGGGTTCATGAGGCCTCTTGATGTTCAAGGGTTTGGGAAGAAGAACTGGGAAACGCATCACCAGTTGGATGTGATGATGGAGAAGGTTTTGAAGAAGCATGAAGATGCAAGACATTGGTACATAATGGTTTCCCAATTGATTATTGCACAGGACATGTTCATAGCCGGGACTAATGGGCCAGCAAGTGTGTTAGAATGGTCACTAGCAGAGCTCATAAGGAACCCACACGCATTAAAGAAAGCAAGAGAAGAAATCGACTCTGTAGTTGGCAAGGACAGACTGGTGAAAGAATCAGACATACCGAATCTTCATTATCTCCAAGCAGTAGTCAAAGAAACTCTGAGGCTTCACCCACCAACCCCAATCTTCGCAAGAGAAGCCATAAGAAGCTGCCAAGTCGAAGGCTATGACATTCCTCAGTACTCCAAAATCTTTATCAATGCATGGGCCATCGGAAGGGATCCGAAACACTGGGACAACGCTCTCGAGTACCGCCCTGAGAGGTTCTTGCAAACAGAGGAGGAACCTGGGAAGGGTAAAATCGATGTGAGGGGACAATACTATCAGTTATTGCCATTTGGAAGTGGAAGAAGAAGCTGCCCCGGCGCCTCGCTTGCGTTGCTTGTTATCCAAGGAACGCTGGCGAGTTTGATTCAGTGCTTTGATTGGGTTGTTAATGACGGGAAGAATAATGAGGTTGATATGTCTGAGGAAGGAAGGGTAACTGTGTTTATGGCAAAGCCGTTGAAGTGCAAGCCTGTTACTCGCTTTGTTCCATTCTCATCAGCATGA 1464 0.4734 MLDTQGYLVLFLLWFISTFLIKSLFTKSRSLKLPPGPPISLPLLGHAPYLRSLLHQALYKLSLRYGPLIHVLIGSKHVVVASSAEMAKQILKTNEESFCNRPIMIASESLTYGAADYFFIPYGTYWRFLKKLCMTELLSGKTLDHFVGIRQDEVEAFLRNILEISKSGKAIEMRQELIRHTNNIISRMTMGKKSIRNDDEVARLRKVIREVGELLGAFNLGDIIGFMRPLDVQGFGKKNWETHHQLDVMMEKVLKKHEDARHWYIMVSQLIIAQDMFIAGTNGPASVLEWSLAELIRNPHALKKAREEIDSVVGKDRLVKESDIPNLHYLQAVVKETLRLHPPTPIFAREAIRSCQVEGYDIPQYSKIFINAWAIGRDPKHWDNALEYRPERFLQTEEEPGKGKIDVRGQYYQLLPFGSGRRSCPGASLALLVIQGTLASLIQCFDWVVNDGKNNEVDMSEEGRVTVFMAKPLKCKPVTRFVPFSSA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93265g00001 487 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Stsc93265g00001 487 SUPERFAMILY Cytochrome P450 29 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 FunFam Predicted protein 277 475 - -
Stsc93265g00001 487 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 PANTHER CYTOCHROME P450 98A9 11 480 - -
Stsc93265g00001 487 Pfam Cytochrome P450 34 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 Pfam Cytochrome P450 274 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc93265g00001 487 Gene3D Cytochrome P450 25 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93265g00001 Stsc-Chr93265 1407 5811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93265g00001 1 480 Cytochrome P450 AT5G06900 38.933 1.13e-123 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93265g00001 K24188 K15814 gmx:100037459 773.081