Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93259g00002 ATGGAAAGAAAGACGTGCATTATTTTTGTTATTATTTTCAATCTTTTGCAAGTACAACTGTTAGCTCTTGCTGACAGTGGCACTTACGTTCCTTCAGAGAACATAGCTATTAACTGTGGCTCTATCTCATCAGAAGTTCAACACTATGGTGGTAGGAATTGGACTGGTGATGTACCTAACAAATATCTAATAGCCGAAGCCCCTTCCATTCCTGATTCTGTTCCTCAAGTTCCATATATGACTGCTCGGATTTTTCGGTCGCCGTTCACCTACAAATTCAATGTAACACCAGGTCCGAGATTCATCCGTTTTCACTTCTATCCAGCTTCTTACTTGAACATGAATGTTTCCAAAGCTTTTTTATCTGTTACGGCTGGTAACTTCTTCACTCTGCTGCACAACTTCAGTGTTTCTTTGAACACGGACTACTTCAATGTGCCATATTTGATGAAAGAATTCATCATCTATGTAAGTGGCAGGACTTTGGAACTCACATTCTCCCCATCATTATCCAATGCCACTGATACATATGCATTTGTGAATGGGATTGAAGTTGTTTCAATGCCATTTGGCTTATACCATTCTTGTCTTGATTCCCCTCTACCATTAGTTGGTCATTATCCTGCTTTATACTACATCTGTGATGATATTGCCATGGAAACCTTGTTCAGATTAAATGTAGGAGGTGATCAAATTTCACCAGAATATGATGAAACAGGTATGTTTCTCACGTGGGAGGCCGACGATCCTTACGTATTTGGGGCTGAGACAGGTATTGAACCCTTTAACATGACCATGCTAGTTCTGTATTCAAATGGTGTTCCTTCTTATGCAGCCCCAAAAGATGTCTACCGCACTTCGCGTTCGATGAGTCCCTTTCCGGCAGGCTTGATCAACTTAAACTATAACCTAACATGGCTTTTCCATGTTGATTCTGGCTTCAAGTATCTAGTTAGGCTTCACTTCTGTGAAACTGATAGCCTAATAACGAAAGTCAACAAAGTTGTATTTAGTATCTACTTAAATAATCAGACAGCTTATGAAAGTTTTGATCCAATAGCCTTGAGTGGGGGCCCTGGAGTTGGTTTATACCAAGATTATGTGGTAATTGTTCCTGGATCTAGTGAGGCAAAGCAGGATTTGTGGCTTGATCTCCACCCATACAAGGATTCCAAACCTATGTATTACACTTCATACTTGAATGGTGTAGAGATTTTTAAACTAAGTAGTGCCAACGACAAGAATCTTTCTGGACTTAATCCTTCTCCTCTCATAAGTAAGTCCAGATTAGGAGTAAAAGCTAAAAATAAAAAGAAAATCAAGTTCACCATCCTCATTGGATGTGGAATTGCTGCTGCGTTGGTTATATCAATTCTCCTATGGCTAATTCTATGCAAGATTATTCGGCCGAAGAGGAGGATGATACCATGCATTGATCTCGTTGCCATCAAGACTAACAATGTCAAAGAGGAAAACAAGACACCCTTTGGCGCTCATATGTCATTGCAAAAGATAAAGGCAGCAACAAGCAACTTCGACGAGGCTCTAATCATCGGAATAGGTGGATTCGGAAAGGTTTACAAGGGTAGCTTTGATGCTGGGGCTACTTATGTAGCCATAAAGCGTGGTGATTGGTTGTCAGAACAAGGTGCCTTGGAATACAAGACAGAGATCGATTTCCTCTCGCAGCTGCGGCATCACAACCTGGTGTCTCTTTTAGGCTACTGCAATGAAGATGAAGAGATTGTTAGTCACAATGCAGAACACTCAAGAGGGGGGGTGAATTGA 1788 0.4083 MERKTCIIFVIIFNLLQVQLLALADSGTYVPSENIAINCGSISSEVQHYGGRNWTGDVPNKYLIAEAPSIPDSVPQVPYMTARIFRSPFTYKFNVTPGPRFIRFHFYPASYLNMNVSKAFLSVTAGNFFTLLHNFSVSLNTDYFNVPYLMKEFIIYVSGRTLELTFSPSLSNATDTYAFVNGIEVVSMPFGLYHSCLDSPLPLVGHYPALYYICDDIAMETLFRLNVGGDQISPEYDETGMFLTWEADDPYVFGAETGIEPFNMTMLVLYSNGVPSYAAPKDVYRTSRSMSPFPAGLINLNYNLTWLFHVDSGFKYLVRLHFCETDSLITKVNKVVFSIYLNNQTAYESFDPIALSGGPGVGLYQDYVVIVPGSSEAKQDLWLDLHPYKDSKPMYYTSYLNGVEIFKLSSANDKNLSGLNPSPLISKSRLGVKAKNKKKIKFTILIGCGIAAALVISILLWLILCKIIRPKRRMIPCIDLVAIKTNNVKEENKTPFGAHMSLQKIKAATSNFDEALIIGIGGFGKVYKGSFDAGATYVAIKRGDWLSEQGALEYKTEIDFLSQLRHHNLVSLLGYCNEDEEIVSHNAEHSRGGVN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93259g00002 595 FunFam receptor-like protein kinase FERONIA 479 584 - -
Stsc93259g00002 595 FunFam FERONIA receptor-like kinase 34 189 - -
Stsc93259g00002 595 Gene3D Phosphorylase Kinase; domain 1 479 583 - -
Stsc93259g00002 595 Pfam Malectin-like domain 37 407 IPR024788 -
Stsc93259g00002 595 PANTHER OS03G0124300 PROTEIN-RELATED 6 464 IPR046957 GO:0004672
Stsc93259g00002 595 Gene3D - 34 188 - -
Stsc93259g00002 595 Gene3D - 217 408 - -
Stsc93259g00002 595 Pfam Protein tyrosine and serine/threonine kinase 518 582 IPR001245 GO:0004672|GO:0006468
Stsc93259g00002 595 SUPERFAMILY Protein kinase-like (PK-like) 502 582 IPR011009 -
Stsc93259g00002 595 FunFam FERONIA receptor-like kinase 217 409 - -
Stsc93259g00002 595 ProSiteProfiles Protein kinase domain profile. 512 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc93259g00002 595 ProSitePatterns Protein kinases ATP-binding region signature. 518 541 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93259g00002 Stsc-Chr93259 4848 6694 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93259g00002 20 583 Receptor kinase-like Gene Family AT3G51550 44.054 1.84e-149 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc93259g00002 Malectin_like 4e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93259g00002 - - gmx:100776859 705.671