Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93259g00001 ATGCAACTGAAAATAACCTCAGGTCAATGCTACCAATTCACATTGGAAGAGATTACCATAGCCACTAACAACTTCAATGAAGATCTAGTGATTGGGGAGGGAGGCTTTGGAAAGGTGGACAAAGGAATAGTAAATGATGGAGTCACTTCTTTCGCTATAAAGCGATGCAAACCGGGTTCACGTCAAGGACTCAAGGAGTTTCAAAATGAGATAAAGTTTTTCTCATTTTGTCACTTGAATCTGGTGCCACTGATAGGCTTCTGCCAAGAAGACAATGAGTTGATACTTGTCTATGAATACATGGCTAATGGCAGTCTTTGTGATCATCTTTACAAGAAACAGAACCAGCCACTTACATGGAATCAGAGACTGAAGATTTGTGTCGGCGCGGAAGAGGACTACATTATCTGCATACCGCCGATCTTTCACTGCGATATCAAGTCATCCAACATATTGTTGGATGAAAACGTGGTACCTAAGATTGCGGATTTCGGGTTGTCCAGAATCATTCCCTCCCCTTGCCACGCTCACATTACCACTCAGGTGAAGGGTATTTTGGGATACTTAGATCCTGAGTACTACAAGAGAAGAAAATTGACTGAAAAATCTGATGTCTATTCATTTGGGGTGGTTTTGTTTGAAGTGTTAAGTGCAAGACCAGCAGTGAATCATGTAGTAGAAGAAGAGCATAGTGAGAAGGTTGGTTTGGCTGAGTGGGCCTTGCATTGTCACCAATGTAGAAGCATTGAACACCTCAATTAG 762 0.4199 MQLKITSGQCYQFTLEEITIATNNFNEDLVIGEGGFGKVDKGIVNDGVTSFAIKRCKPGSRQGLKEFQNEIKFFSFCHLNLVPLIGFCQEDNELILVYEYMANGSLCDHLYKKQNQPLTWNQRLKICVGAEEDYIICIPPIFHCDIKSSNILLDENVVPKIADFGLSRIIPSPCHAHITTQVKGILGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLSARPAVNHVVEEEHSEKVGLAEWALHCHQCRSIEHLN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93259g00001 253 PANTHER OS07G0166700 PROTEIN 10 250 IPR045272 GO:0004714|GO:0006468
Stsc93259g00001 253 SUPERFAMILY Protein kinase-like (PK-like) 6 230 IPR011009 -
Stsc93259g00001 253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Stsc93259g00001 253 FunFam receptor-like protein kinase FERONIA 1 100 - -
Stsc93259g00001 253 PIRSF ILK 10 241 - -
Stsc93259g00001 253 Pfam Protein tyrosine and serine/threonine kinase 30 230 IPR001245 GO:0004672|GO:0006468
Stsc93259g00001 253 SMART serkin_6 25 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc93259g00001 253 Gene3D Phosphorylase Kinase; domain 1 1 100 - -
Stsc93259g00001 253 Gene3D Transferase(Phosphotransferase) domain 1 101 252 - -
Stsc93259g00001 253 ProSiteProfiles Protein kinase domain profile. 25 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93259g00001 Stsc-Chr93259 2194 2966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93259g00001 4 252 Receptor kinase-like Gene Family AT3G51550 50.787 2.19e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc93259g00001 PK_Tyr_Ser-Thr 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93259g00001 - - vvo:131646089 357.836