Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93255g00001 ATGGAAGAAGTTAATGTTGAAATCATTTCTAAAGAAGATATTAGACCTTCTTCTCCTACACCTTCTCACCTAAGAACCTTCAAACTCTCAATTTTGGATCAAATCATTCCCATTCCTTATGCTGTAATCACCCTATTCTACACGTCACACAATCCCTTTGAATTCCCACAGAAATTAGAATTGCTTAAACAATCATTATCTGAGGCACTAACTCAATTCCACCCTCTTGGTGGCAAGATCAAAGATGACTTGAACATTGATTGCAACGATGAAGGTGCAAACTTTGTAGTAGCAAGAGTGAATTGTTCTCTTGCAAAGTTTCTAAGCAAGCCTGATTTGAATTCACTAAACAAGTTTCTTCCAATTCATTTCTTCCATGAAGCATCAACAGGAGATCATGTGACTAACATTCAAGTCAATGTCTTTGATTGTGGTGGAATTGCTATTGGATTTTGCATTTCTCATAGGACAATTGATGGTGAATCACTTAGCACCTTCGTTAAGTTGTGGACAGAAAGAACCGGCCACAACCGGAACTCAAAACCATGGAAAGAACTGAACTTTTCTGCACGTTCTCTCTTCCCTACAAGTACTTTACGTTTCAGAGACTTGTCAAAGGAAATTCGGGGGTCCTATTTTAAGGAAGGAAAATGGGCCACAAGGAGGTTTTTGTTCACAAATTCAACTATTGCCACACTTAAGGAACAAATATTGGCGAAATCTTCATCGAAGAATCATCGTGCCACACGCGTCCAGATAGTTTCTGCATTGTTGTGGAAGTGTTTCATGGCCGCGTCGAAGGCACAATTCGGAGATCACAGGCCTTCTGAGTTGAACCATTTTGTGAATCTTCACCGAAAAATGGAAGAACCCATGAGTCTTAACAACTCTATAGGAAACTTTGTATGGTTGGCATCTGCAAAGCACATGGCAGAACATGAGTTGGATTTGGCTGAGTTAGTGACTAAATTGAACAACTCAATTCAAGAAGTTGACAAGGATTTTGTGGCAAGATTGCAGAGTGAGGAGGAAAGTTCAATTATGGAAGATTCTGTTGAGAAAATCCGTGAAGCATGGTTTAATAAGGGTGAAGAATTTGAACAATATCTTTTTAGTAGTTGGTGTAACTTTGGACACCATGATTCTGATGATTTTGGGTGGGGAAAACCTATCTGGGTTAGTAGTGTTGGTACAACTACTTCAGTGCATTCAAATGTAGTCTTCTTAGTTGATACCAGGTTTAAAGATGGTATAGAAGCTTGGGTTACCTTGGATGAGAAGAAAATGAAATATTTGGAGTCATGCAATGAATTGCTCACTTATGCAACCGTTGATCCAAGTCCTTTGGCAATGGAGGTCCACAAGGTCTAA 1371 0.3924 MEEVNVEIISKEDIRPSSPTPSHLRTFKLSILDQIIPIPYAVITLFYTSHNPFEFPQKLELLKQSLSEALTQFHPLGGKIKDDLNIDCNDEGANFVVARVNCSLAKFLSKPDLNSLNKFLPIHFFHEASTGDHVTNIQVNVFDCGGIAIGFCISHRTIDGESLSTFVKLWTERTGHNRNSKPWKELNFSARSLFPTSTLRFRDLSKEIRGSYFKEGKWATRRFLFTNSTIATLKEQILAKSSSKNHRATRVQIVSALLWKCFMAASKAQFGDHRPSELNHFVNLHRKMEEPMSLNNSIGNFVWLASAKHMAEHELDLAELVTKLNNSIQEVDKDFVARLQSEEESSIMEDSVEKIREAWFNKGEEFEQYLFSSWCNFGHHDSDDFGWGKPIWVSSVGTTTSVHSNVVFLVDTRFKDGIEAWVTLDEKKMKYLESCNELLTYATVDPSPLAMEVHKV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93255g00001 456 Gene3D - 216 442 IPR023213 -
Stsc93255g00001 456 PANTHER F21J9.9 7 442 - -
Stsc93255g00001 456 Coils Coil 310 330 - -
Stsc93255g00001 456 Pfam Transferase family 5 437 - -
Stsc93255g00001 456 Gene3D - 3 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93255g00001 Stsc-Chr93255 1618 2988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93255g00001 4 433 Monolignol Biosynthesis Gene Families AT5G48930 23.427 4.21e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93255g00001 - - aip:107628104 565.074