Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93234g00001 ATGGTATGCTGGTGGTGGACCCCACTCACAACCGCATTCCTTTATTCTCTCTCCTCTCTTTATATAAGGAACCCTAATCCCCAATTCTTTCCTCGCATTCCATTTCCAAGTAAAATCAACGCAACACGCTTTCTTCAAAACGCAACGAATCAAAACATGATTTCATCGGCATCCTTTGCTGCTTCTCTCCCCGCCGCTAACTTCGCCGGCGGATCCGTCGCTCCGCCTCCTAGTCGCGTCAGATCCCGCCCGATTGTCTCCTTTGCCACCGCTACAGCCACCGCAGAAGCTCGCTCTACCTGGACGGACCAAAGGAGGCCTTCGTTTCTGAACCCCGACGCGGTATTCCCTTCCTGCACTTCACTCTATGAGATTCTTGGTATTCCCGCTGGTGCCTCCAGCCAGGAGATCAAGGCGGCCTACCGGAGACTCGCTAGAGTCTGCCACCCGGACGTGGCAGCGATTGACCGGAAAAATTCGTCGGCGGACGAGTTTATGAAGATTCACGATGCTTACTGCACTCTGTCGGATCCTGACAAGCGCGCCAATTATGATCGGAGCCTCTTCGGCTCGCGGCAACGGCCGCTGTCGACGGCGTCCGTATTTTCTGGCTACAGCGGGCGGAACTGGGAAACGGACCAGTGCTGGTAG 651 0.553 MVCWWWTPLTTAFLYSLSSLYIRNPNPQFFPRIPFPSKINATRFLQNATNQNMISSASFAASLPAANFAGGSVAPPPSRVRSRPIVSFATATATAEARSTWTDQRRPSFLNPDAVFPSCTSLYEILGIPAGASSQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHDAYCTLSDPDKRANYDRSLFGSRQRPLSTASVFSGYSGRNWETDQCW 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93234g00001 216 Gene3D DnaJ domain 111 203 IPR036869 -
Stsc93234g00001 216 SMART dnaj_3 120 180 IPR001623 -
Stsc93234g00001 216 SUPERFAMILY Chaperone J-domain 74 184 IPR036869 -
Stsc93234g00001 216 ProSiteProfiles dnaJ domain profile. 121 188 IPR001623 -
Stsc93234g00001 216 PRINTS DnaJ domain signature 141 156 IPR001623 -
Stsc93234g00001 216 PRINTS DnaJ domain signature 160 180 IPR001623 -
Stsc93234g00001 216 PRINTS DnaJ domain signature 123 141 IPR001623 -
Stsc93234g00001 216 Pfam DnaJ domain 122 185 IPR001623 -
Stsc93234g00001 216 CDD DnaJ 123 177 IPR001623 -
Stsc93234g00001 216 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 63 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93234g00001 Stsc-Chr93234 5795 6445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93234g00001 123 185 C2H2 Transcription Factor Family AT1G74250 43.284 1.98e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93234g00001 - - aip:107642575 290.041