Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc93127g00002 ATGGTTGCAATCTTAGCTTCATATACTGTCACCCCAAAAGAGGAAACTCCCAAGGGTTTTCTATGGCTATCAGACAATGACCAACTCTGGCGTTGGAGTCATACACCCTTACTCTACATTTACAAGCCAAACCATAACAATGTCGATGTCCATGTCCTTGTTGAGACAATGAGAGGGTCCCTTGGACAGATTTTGGTTCATTACTATCCGCTAGCCGGCCGGTTGAGCTGGACGAAAGGCTGCCGGTTGGAACTAGACTGTAATGCAAAGGGAGCTGTGTTGCTTGAAGCCGAATCAACCAAGTCAGCGGTTGAGCTTGGTGACTTCTCACCAAATAATGAGTCCGTTAAAGAACTCATCCCAACTGTTGATTACTCTCGTCCCATAGAGGAGCTTCCTCTGTTTGTGGCACAGGTGACAAGGTTCCATGGCAGCAATGTCATTGCCATAGGAATTCTTTGGTCTCATCCATTGGGGGATGGGTCTGCAGCCATTCATTTCATCAATTCATGGGCAAAGCTCACCCAAGGACGCACAATCAATGCAAATGAACTGCCGTTTCTTGACCGGACGGTGCTCAAACCGCCCTCACACCAGCCGTCGCGGCGCTTTGATCACCGGGAGTTTAAGCCTCTGCCACTTGTTCTCGGAAAAACCGACAACATTGAAGAGCAAAAGAAGAAAACGACCTTTGCACAGTTGAAGCTCACACCAATTCAGGTCCAGAAATTGAGGAAGAATGCCAATAAGAACGCGAAGTCTCAGAGACAATACACTAGATTTGAAGTTATTGGTGCCTATATATGGCGATGTGCTTCTAAAGCTCGTCGTGAACTTAAAGAAAACCAACCAACTGCTGCCAAATTGAATGTCAATATCCGAAACCGGCTTAATCCGCCTCTGCCTGAGAGATATTTTGGGAATGCTTTGGCTCCAACTGTTACCCCAACGTGCTATGTCGGAGATATCATATCTCGGCCGTTGAGTTACACGACGCAGAAGATAAGGGAAGCAGTGGAAAGAGTAAGCAGTAATGAATACTTAAGATCACAGATGGATTTCATAGCAAAGAAAGAGAGGTGGGATTCGATTAGGACACCTTATTTGGAGAGAGGAGAGTATAGGGCAGATGTGCCTTTCTTTGGGAACCCCAACATTATACTTGGAAGCTGGATGAGTATGCCAGCATATGAAGCTGATTTTGGGTGGGGAAAGCCCCTTCATTTTGGTCCAGGTGCTGTGTGCCCTTATGACAGGGCCATGATTTCTCTGAGGCCACAGGAGGAGGATAGTCATGGCGTTGATGATGTTGTTGTCTTCCTGCATTTCCAGGAGGCATATATGCAAGATTTCATCAAGTTCTTCTGGGAAGATATAAGAGAGTCTAGTTGCAGCACACAAGCCAAGCTTTGA 1413 0.4636 MVAILASYTVTPKEETPKGFLWLSDNDQLWRWSHTPLLYIYKPNHNNVDVHVLVETMRGSLGQILVHYYPLAGRLSWTKGCRLELDCNAKGAVLLEAESTKSAVELGDFSPNNESVKELIPTVDYSRPIEELPLFVAQVTRFHGSNVIAIGILWSHPLGDGSAAIHFINSWAKLTQGRTINANELPFLDRTVLKPPSHQPSRRFDHREFKPLPLVLGKTDNIEEQKKKTTFAQLKLTPIQVQKLRKNANKNAKSQRQYTRFEVIGAYIWRCASKARRELKENQPTAAKLNVNIRNRLNPPLPERYFGNALAPTVTPTCYVGDIISRPLSYTTQKIREAVERVSSNEYLRSQMDFIAKKERWDSIRTPYLERGEYRADVPFFGNPNIILGSWMSMPAYEADFGWGKPLHFGPGAVCPYDRAMISLRPQEEDSHGVDDVVVFLHFQEAYMQDFIKFFWEDIRESSCSTQAKL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc93127g00002 470 Pfam Transferase family 1 451 - -
Stsc93127g00002 470 Gene3D - 1 211 IPR023213 -
Stsc93127g00002 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 447 - -
Stsc93127g00002 470 Gene3D - 218 458 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc93127g00002 Stsc-Chr93127 3628 5989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc93127g00002 2 457 Monolignol Biosynthesis Gene Families AT5G48930 33.406 1.07e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc93127g00002 K13065 - gmx:100779814 488.804