Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc929g00003 ATGCAGAGCTTCAAGACAGCGCAAACAAGCTCCCAACTCTATTGTCATTCTCCCTTCTTGCTTCGGGGAGACAATAACACCAACCGGAACTCAACGCGTTTCTCTGATCTTGGCGAGCTTCAACATTCTGCAACTGTGTTTCATCATCAAGACGCTGTTGACTTAAGCCATAGCTCAATGTTTAATATGAAGTCCAACAATGTAGCTGTTTCTGTTGCTGGGACTAACTTGCAGTATGGGACATTGAACACGAACCTTGGGAGTGGAGAGGTTGGTGGTTCAGGGATGGGTATGGGGAATAACATGGCATTAGGAAATGGAAATGTTGAGAATTGGGGTGATTCAGGGATGGTGGGTGAAAACAGCCAACAGACTGATGATACTTCAACAGATATTGAGACTGATGATAGAAATCAATGCAATAGAGTTCAGAATGGGGCACCCACGGTTGTGGACTCAAAGGATGAGACAAAGATCAAAGCTGATGACGCCAAGACTATGCGGAGGCTTGCCCAAAATCGTGAGGCTGCGAGGAAAAGTCGCTTAAGAAAAAAAGCATATGTACAACAGCTGGAGAACAGCCGAGCGAAACTCTTACAGTTGGAGCAAGAGCTTCAGCGAGCACGTCAGCAGGGTATATTTATTGCAACTAATGGGGATAATAGTAATTCTTCTCTTGGAAATGGTAATTAA 693 0.4459 MQSFKTAQTSSQLYCHSPFLLRGDNNTNRNSTRFSDLGELQHSATVFHHQDAVDLSHSSMFNMKSNNVAVSVAGTNLQYGTLNTNLGSGEVGGSGMGMGNNMALGNGNVENWGDSGMVGENSQQTDDTSTDIETDDRNQCNRVQNGAPTVVDSKDETKIKADDAKTMRRLAQNREAARKSRLRKKAYVQQLENSRAKLLQLEQELQRARQQGIFIATNGDNSNSSLGNGN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc929g00003 230 SUPERFAMILY Leucine zipper domain 165 208 IPR046347 GO:0003700|GO:0006355
Stsc929g00003 230 SMART brlzneu 161 224 IPR004827 GO:0003700|GO:0006355
Stsc929g00003 230 CDD bZIP_HBP1b-like 165 217 - -
Stsc929g00003 230 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 168 183 IPR004827 GO:0003700|GO:0006355
Stsc929g00003 230 Pfam bZIP transcription factor 164 203 IPR004827 GO:0003700|GO:0006355
Stsc929g00003 230 Coils Coil 184 211 - -
Stsc929g00003 230 PANTHER TRANSCRIPTION FACTOR TGA9 109 222 - -
Stsc929g00003 230 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 163 207 IPR004827 GO:0003700|GO:0006355
Stsc929g00003 230 FunFam BZIP family transcription factor 164 213 - -
Stsc929g00003 230 Gene3D - 164 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc929g00003 Stsc-Chr929 16714 20855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc929g00003 3 229 bZIP Transcription Factor Family AT1G68640 37.308 5.42e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc929g00003 bZIP_1 5.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc929g00003 K14431 - gmx:100797393 255.758