Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92938g00001 ATGGTTCACTTGGCCACAATCCCAGTAACTGGCACTGGCATCAACCCAGCAAGAAGCTTTGGATCTGCTGTCATTTACAACAAAGACAAAATCTGGGATGACCATTGGATATTCTGGGTTGGACCAATTCTTGGAGCTGCAGCAGCTGCAATCTACCATGAACACATTATCAAAGCATCTGCCATAAAAGCCCTTGGATCCTTCAGGAGCAACAACTAA 219 0.4521 MVHLATIPVTGTGINPARSFGSAVIYNKDKIWDDHWIFWVGPILGAAAAAIYHEHIIKASAIKALGSFRSNN 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92938g00001 72 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 68 IPR034294 -
Stsc92938g00001 72 SUPERFAMILY Aquaporin-like 2 57 IPR023271 -
Stsc92938g00001 72 Gene3D Glycerol uptake facilitator protein. 1 72 IPR023271 -
Stsc92938g00001 72 Pfam Major intrinsic protein 1 53 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92938g00001 Stsc-Chr92938 7466 8202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92938g00001 1 71 Major Intrinsic Protein MIP AT4G35100 81.690 1.31e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92938g00001 K09872 - oeu:111393494 132.494