Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92905g00002 ATGGCAACTGATATGCAGAGGCTTATTGGAACCAGTGAAGATGATGACGAAGAAATAGAGATGGATGTGAAAGAAGAGGACGATGGAGATGAAGATGAAGAGGAAAATGGAGGTGATCATGGAAATGCTTCGGATATGGTAGGGATTGATGGCGGGAATGGTTTAGTAACTACTGGTGGTGACAACAGGTTTCAACAACAGCAGCAGTTTCAAGACCAAGTTGGAACCCCAGGTGGATCTGCTCGAAGATGTAGACCACTAGAAGAGAAAGAAAGGACCAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACCGCTAAGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTTAGAGGTCAAAGGCCAACTGGTGGTAATTCTGCAGTTGTCACTCCCTCTTCTCCCGTGCCTTCACAACCAACTCCATCTGCTTCCATCAGGGGAGTTGCTTCTGGCTATAGGAGCTCATTAGAGTATAATACATGTCAAACAAAAGGTGTTTTCATGCCAACTCCATCTCCGTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCCATGGTGGGGGATGGAGAATTACAAAGAGAGAATCAACCTTTGGTTGGCAGTGGTTCAATGGATACTGTTAATGAGAAGCAG 645 0.4651 MATDMQRLIGTSEDDDEEIEMDVKEEDDGDEDEEENGGDHGNASDMVGIDGGNGLVTTGGDNRFQQQQQFQDQVGTPGGSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRGQRPTGGNSAVVTPSSPVPSQPTPSASIRGVASGYRSSLEYNTCQTKGVFMPTPSPYDLSSSSRSQTSMVGDGELQRENQPLVGSGSMDTVNEKQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92905g00002 215 MobiDBLite consensus disorder prediction 58 76 - -
Stsc92905g00002 215 MobiDBLite consensus disorder prediction 171 215 - -
Stsc92905g00002 215 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 78 120 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc92905g00002 215 Pfam BES1/BZR1 plant transcription factor, N-terminal 81 120 IPR008540 -
Stsc92905g00002 215 MobiDBLite consensus disorder prediction 116 147 - -
Stsc92905g00002 215 MobiDBLite consensus disorder prediction 1 96 - -
Stsc92905g00002 215 MobiDBLite consensus disorder prediction 11 38 - -
Stsc92905g00002 215 MobiDBLite consensus disorder prediction 121 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92905g00002 Stsc-Chr92905 7248 8355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92905g00002 1 215 Glycoside Hydrolase AT2G45880 44.223 1.21e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc92905g00002 BES1_N 6.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92905g00002 K01177 - gmx:100812659 244.588