Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92891g00002 ATGGGAGTGGTAGGATGGTTTTGTTCATGGACTCCAGCCCCATTTCTGGCTATGGTGCTTGTGGAGTGCCTTGATGTTGGCTTAACCACACTCAGCAAAGCAGCCATGTCCAGAGGGATGAGTCACTTCGTTTTTGTTGTCTACTCAAATGCTCTTGCCACTCTCATCCTCCTCCCTTCTTCTTTCTTCATCAACAGAGCTACAACACCACCTCTTTCTTTCTCGCTTCTTTGCAAATTCTTCCTCCTTGCCCTTATTGGCATAACTGTGATGCAGAATTGTGTTTTCACTGGCATAAGCTACACCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATTA 352 0.4631 MGVVGWFCSWTPAPFLAMVLVECLDVGLTTLSKAAMSRGMSHFVFVVYSNALATLILLPSSFFINRATTPPLSFSLLCKFFLLALIGITVMQNCVFTGISYTSPTLGSAMSNLTPAI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92891g00002 117 PANTHER WAT1-RELATED PROTEIN 13 117 IPR030184 GO:0016020|GO:0022857
Stsc92891g00002 117 Pfam EamA-like transporter family 26 117 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92891g00002 Stsc-Chr92891 7 669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92891g00002 11 117 Nodulin-like Gene Family AT5G07050 38.318 4.15e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92891g00002 - - lja:Lj4g3v1535180.1 167.548