Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92879g00001 ATGGATGCACGTAGCTACTCGTTCGATTCGGAATCTGCTACTGCAACAGATTTGTTTTGCTGTGACGTTGATGAGGAGTATATTCCAAAGGCTGGAATGACTTTTCCAATACTTGAAGTAGATGCTGCTTTCTACAAAAAGTATGCTAAACGTGCTGGGTTTGCTACTAAAATAAGGAACACCAATAGGTGTAGGGAAACCAAGGAAATAAAGAATCAACTCATCACATGTAACAGAGAGGGGAAATGGATATTTGAAATATCGTACGTTGAGAAGACGAATCCCACATGTGGTGCAAACTGCCCTGCACGAATTTATGTGCACATAGTGAAGAAAACCAAAATATCGTGTATTTCAAAGGTTGTTCTTCATCATTCACATCCATGTTGTCCTGATCAAGCTCAGATGTTACCTCAGCATAGGGAGCTCAGAAATAAGGCTTTGAGCATCAATGACTGGGATACCAATTAA 471 0.4013 MDARSYSFDSESATATDLFCCDVDEEYIPKAGMTFPILEVDAAFYKKYAKRAGFATKIRNTNRCRETKEIKNQLITCNREGKWIFEISYVEKTNPTCGANCPARIYVHIVKKTKISCISKVVLHHSHPCCPDQAQMLPQHRELRNKALSINDWDTN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92879g00001 156 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 142 - -
Stsc92879g00001 156 Pfam FAR1 DNA-binding domain 44 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92879g00001 Stsc-Chr92879 2568 3520 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc92879g00001 FAR1 3.4e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92879g00001 - - aip:110271906 165.236