Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92850g00001 ATGACGGATTGGCATTCAACTCCGTTGGATCTGAATTCCATGCACGAGGAATCTCAATTGAAAGAGCAAATGGAGAATCTGAATTCCATTGATCAGGTTGGGCAATTGGATGATCAAACAGAGGTTAATGTTTTTCAATTGGATGAAGAGCATGTCCCCAAGGTTGGGATGACATTTAAGTCATGTACAGAAGCTGGTGAATTCTACAAGGGGTATGCTAAACGAGCTGGATTTTCCTCCAAAATCAGAAATTCACAAAGAAATAAAAAGACCGGTGCAATCAAGAATCAACTCTTCACATGTAAGAGAGAGGGAAAAAGTAGATCTGACATTCCTGAGGCGGAAAAGACGAACCCCATGTCCCCGGCAAATTGTCAGGCAAGGATGTTCGTTCATATCGATAAGTTGACTCAGCGTTATGTTATTTCCAAAGTTGTGTTGGAGCATTCGCATCCATGCTCTGCCGATCATGCAGAGATACTACCTTAA 489 0.4192 MTDWHSTPLDLNSMHEESQLKEQMENLNSIDQVGQLDDQTEVNVFQLDEEHVPKVGMTFKSCTEAGEFYKGYAKRAGFSSKIRNSQRNKKTGAIKNQLFTCKREGKSRSDIPEAEKTNPMSPANCQARMFVHIDKLTQRYVISKVVLEHSHPCSADHAEILP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92850g00001 162 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 153 - -
Stsc92850g00001 162 Pfam FAR1 DNA-binding domain 67 153 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92850g00001 Stsc-Chr92850 1020 1856 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc92850g00001 FAR1 6.9e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92850g00001 - - adu:110280446 128.257