Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92813g00002 ATGGGAGAAACACACCACAACCGTCCAACATCGTCAAGACTTGGGATGAGGGCCGCCGTCGACTGGCTCATCAAGAAGGCAAAGGCAGCCATCGACGAGCTCGCCGAGCTCCCCGCATGGAAACCAACTGCCACTACCACCACCGTCACCACCGCCGTCGCCACGAACTCAAACGTTGCTGTTCAACAACAGAAGCTCCGGGAGGAGGAGGAAAATCACCAGCTGAACCAAATCGTCCACCGCCAGACGACCACGGTGGACGACGCTATGGTAGCTTCTGGTAGCCGAAAGGCTACCGCACTGGTTGGTGGCAGTGGAAGAATCTCGGAATTTCAACTGCAACATTTGAACGACGATGACGGTAAATACAACAGTGGCGGTTCTGCTTTCCTTCCGCCGACTTTGGACACCGACATCGCTGATACCATTAAGTCCTTCTTTCCGACGGTTGACACGGCGGAGGTTGCAACAACGACGTCGTCGTTGTCGTCATTTCATAACTATCCTCCGCCGCCGGATTTGCTTTCGCGTACCACTAGCGTTGCCAGCAACCACAATCACCACCACCACCACCACCAACACCATCATCAGCAGCAAGATCTGCGGCTCTCACTTCAGTCTTTCCAGGACCCATCGATTCTTCTTCAGCAACACCATCAGCAGCAGCAGCCTCCACCACACCAGCAGCATGTTCACGAGCAAGTGCTTTTCGCCGGAACCACCGCGCTAGGGTTCGACGGCAGTTCTTCCGCATGGTCTGAACAGCAGCACCAGCAAGAGGAGCAGGAGCATGGAAGGTTGCAGAGAATGGTGGCTTGGAATAATGCTGCTGCAGATGCTGGTAGCATTGGCCATGGCAGTGGATTCAACTTCAACTCACCGGCGGCGGCGGCGGTGCCGTCTCCCGTGATGTTCGGCCATGGCCAGTTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGTTTCGTGCTTGGATAGATCCTTCTTCGATCGCCACGGCTGCAGTGTCAGTGGATCACCACCACTACCTTTCACCGGCCGCGATCCATCAAGCTTCTATTGGGTTTGCCGGTTCTTCTTCCGGCAACTTCTCCGGCTTTCGCATACCAGCACGAATTCAGGGTGCGGAGGAGCACGACGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1197 0.5572 MGETHHNRPTSSRLGMRAAVDWLIKKAKAAIDELAELPAWKPTATTTTVTTAVATNSNVAVQQQKLREEEENHQLNQIVHRQTTTVDDAMVASGSRKATALVGGSGRISEFQLQHLNDDDGKYNSGGSAFLPPTLDTDIADTIKSFFPTVDTAEVATTTSSLSSFHNYPPPPDLLSRTTSVASNHNHHHHHHQHHHQQQDLRLSLQSFQDPSILLQQHHQQQQPPPHQQHVHEQVLFAGTTALGFDGSSSAWSEQQHQQEEQEHGRLQRMVAWNNAAADAGSIGHGSGFNFNSPAAAAVPSPVMFGHGQFFSQRGPLQSSNTPSFRAWIDPSSIATAAVSVDHHHYLSPAAIHQASIGFAGSSSGNFSGFRIPARIQGAEEHDGVSDKPSSASSDSRH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92813g00002 398 MobiDBLite consensus disorder prediction 169 202 - -
Stsc92813g00002 398 MobiDBLite consensus disorder prediction 376 398 - -
Stsc92813g00002 398 MobiDBLite consensus disorder prediction 183 197 - -
Stsc92813g00002 398 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 319 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92813g00002 Stsc-Chr92813 4583 6391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92813g00002 13 398 TCP Transcription Factor Family AT3G15030 39.851 2.13e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc92813g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92813g00002 - - aip:107630075 517.309