Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92774g00001 ATGCGTTCCACTAACAACATATTCCTTATAGACTGCATAGGCCAGGTTGTTGGCCGAGAGGATCCTGAGGACATTGTCACAAATGCTGGTCAGTCCAGCAAACGTATGAGGCTGTACTTAGAGGATGCAGGCTTGCTTAATCTGGGTAAGCAAGCAACCCAACCTATCTCTCACCTTCAAAGCCAAGAGCAGCAATTTGTGACTGAGGAGATCAGTAGTGGTGAAATCCCATTTCACACTATAGAAGATGTTTATAACATGACTGAGGCTTATGCCTCTTGCACAGGGTGCTACAAGAAAGTGATTTCTAAGAATGATTATTATCAATGTGGTGAATGTGGACAGCGTGCTTCAAAACCTCCACTGAGATATCGTATAAGAGTCGTTATCACTGATTCCACGGGGTGTTTGAACATTTTGCTTTGGAATCCTGAAGCTGTTCTTATTGTTGGGAAGTCTGCCACTGATGTGAGGGCTTTGAGTAAAAATGAGAAGAGTTGTTCCTATCCCAAATTCTTCGATGTCATTATTGAGAAGAAATACCTGTTCAAGATAGCTGTAACATTGGAGAATATGACCTCTGGTGATCCATTTTATAGTGTCTCCAAGATAAGTGATGATCAGAATCTTATTGAGCTGTATGGTTCCCAGTCTGCTATGCTGGAGCAGATTGTTGATCAAAGTGTTGAGAATTCTCACCCTGTTGTTGTTACAGTAGAGTCTTCTACTGATGGTTCTGGTGGTTCAACTGTGTCCCTGTCAAAGGATTCTCCAAAGGGGGGTAACTTGGAGATTTCTTTGGGAAGTCCAGCTATGAGTGGCAAGGCTAAAGGGCAAGGTTCTAATGGCAAAACCTTTAAGCGTGTTGGAGGCAAGAGAAAGCATGACTGA 891 0.4287 MRSTNNIFLIDCIGQVVGREDPEDIVTNAGQSSKRMRLYLEDAGLLNLGKQATQPISHLQSQEQQFVTEEISSGEIPFHTIEDVYNMTEAYASCTGCYKKVISKNDYYQCGECGQRASKPPLRYRIRVVITDSTGCLNILLWNPEAVLIVGKSATDVRALSKNEKSCSYPKFFDVIIEKKYLFKIAVTLENMTSGDPFYSVSKISDDQNLIELYGSQSAMLEQIVDQSVENSHPVVVTVESSTDGSGGSTVSLSKDSPKGGNLEISLGSPAMSGKAKGQGSNGKTFKRVGGKRKHD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92774g00001 296 CDD RPA1_DBD_C 80 212 IPR047192 -
Stsc92774g00001 296 SUPERFAMILY Nucleic acid-binding proteins 81 206 IPR012340 -
Stsc92774g00001 296 MobiDBLite consensus disorder prediction 239 259 - -
Stsc92774g00001 296 Pfam Replication factor-A C terminal domain 80 191 IPR013955 -
Stsc92774g00001 296 Gene3D - 50 241 IPR012340 -
Stsc92774g00001 296 MobiDBLite consensus disorder prediction 239 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92774g00001 Stsc-Chr92774 603 2558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92774g00001 86 194 Core DNA Replication Machinery Family AT5G08020 29.730 2.21e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92774g00001 - K07466 ahf:112718168 181.8