Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92758g00002 ATGCATCATTCATTTTCTGATTCACAGTTGAGGTCTTGTTACTGCTCACAAGAAGGATCCAACCTCTCTTTCTCCTTGAATCACGCAAAAGCTCAGCCATCTTCAATGTTGCAGTCGAGTATCTCACAAGGAAATCTTATCGAGCTCCGGCATGATTCCAGTCTCCTTTATCCTCAATTACAAAATAAGTTACCAAATAATATTGAGTCTTCTGAGTTGTATGGAAGGCAGGATTTCGCATCATCTTCTCCATATTCAGAATCATCAGGAATGGATGGAATTCATAAAGATAGCATTTTAATTGGAAAAAAGTACCATGTGCCTCAAACTAATGTAAATGGATCTAGCTTTATGGTGAAGCATGCTGAGGACAATTCTTTAAGTTCAGAAAAAAAGAATATAATTGAAGGAAAGAATCCTATTGGTGTAGCAGATGGCAAGTTTTATGAAGGGAAATCACTTGCTGCTCATATGGGGCTGGTGACTGAATTGAATGGCAAGATTAATATGCAAAAGGATTGGGAGCAAAGTTCCGAGGACATGAGGCAAACTACTATAAATAGTAAGAAATATGCTGTTGCTGAAGGTATGAATGGTGGACAGGGATCTGATTTTGCATTGACAAGAAACATTAACTTAAATGGATCTGTGCCAACCTGTAGAGAAACCTCTTGCCACAAAAATTCTTTCAGTGATCTTTTATGTGATCTGTCACCCCTACCTACATGTAAAGCTTTGCAAGTTCAACCTTCCATGAGTTGCACTGATCCCTGTTTTAATGAAGTTTCAACTTTAAGTCCTGCTTCTTTGTATCATGTGCAACATAATGATCCCCGTCCTTGCTCAAATTCAACTATGAATGATCAGCACAATCCAAACAACACTTCTTTCCATAAAGTTCCTTCTTTTATTGATGATGACTTGATAACCAGTACCGACCAGAAATTTCCAGTTATTAGTGGGCATTCTGCTGGAAAATCAAAAGCTGGAGATGTCATGCCAGGACAATCAAAAAATTTAGGAAACTGTAATGATGTAAATCAACCAAAACCATTTGGGCTTGTAGAAGATGTGACTGGTGTTGTTCCTCGAGCCATTCATTCTACATTTGCATGCATCCCACCTATTGTGGATGTAAATGGAAGTACGCCTGTATCCTTGTCTTGTACAGAGGTGGATAGCATCATCGCAGACTCTGAACCTGAGGATTTTAAATATGAAGAAACTGACAAAAATGAGTCCCTTTCTGACGCAATGATAGCAGAAATGGAAGCGAGCGTCTATGGTTTGCAGATAATAAAGAATGCTGATCTTGAGGAACTTAAGGAGTTAGGATCCGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAAGTGATGTTGCTATAAAGAGGATTAAGAAGAGCTGTTTTGGAGGGAAACCTTCTGAACGAGAACGATTGACAAAAGATTTTTGGAGAGAGGCACAAATTCTTTCAAATCTTCACCATCCCAATGTCGTTGCATTTTATGGGATAGTACCAGATGCAGTTGGGGGAACATTGGCAACTGTAACCGAGTATATGGTTAATGGTTCCCTACGGCATGTCCTTCTCAAAAAAGATAGGGATCCAGAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAGAGGAACACCCTGATATCTGGTGGTGTGCGAGGAACTCTTCCTTGGATGGCACCGGAGCTGTTGAATGGGAGCAGTAACAGGGTTTCTGAAAAGGTTGATGTTTTCTCATTTGGCATTTCAATGTGGGAGATCTTGACTGGCGAGGAACCTTATGCAGATATGCATTATGGTGCCATTATTGGGGGGATTGTAAAGAACACTCTTAGACCACCCATTCCAAAACATTGTGATCCTGAATGGAGGAAGCTCATGGAAGATTGTTGGTCACCTGATCCTGAAAGCCGACCGTCCTTCACCGTGATAACTAACCGGTTACGATCTATGTATAAGGTGCTTCAAGAAAAGGGGGTTGTCAGGCACGACAGATAA 2034 0.4046 MHHSFSDSQLRSCYCSQEGSNLSFSLNHAKAQPSSMLQSSISQGNLIELRHDSSLLYPQLQNKLPNNIESSELYGRQDFASSSPYSESSGMDGIHKDSILIGKKYHVPQTNVNGSSFMVKHAEDNSLSSEKKNIIEGKNPIGVADGKFYEGKSLAAHMGLVTELNGKINMQKDWEQSSEDMRQTTINSKKYAVAEGMNGGQGSDFALTRNINLNGSVPTCRETSCHKNSFSDLLCDLSPLPTCKALQVQPSMSCTDPCFNEVSTLSPASLYHVQHNDPRPCSNSTMNDQHNPNNTSFHKVPSFIDDDLITSTDQKFPVISGHSAGKSKAGDVMPGQSKNLGNCNDVNQPKPFGLVEDVTGVVPRAIHSTFACIPPIVDVNGSTPVSLSCTEVDSIIADSEPEDFKYEETDKNESLSDAMIAEMEASVYGLQIIKNADLEELKELGSGTYGTVYHGKWRGSDVAIKRIKKSCFGGKPSERERLTKDFWREAQILSNLHHPNVVAFYGIVPDAVGGTLATVTEYMVNGSLRHVLLKKDRDPERPICKVGDFGLSRIKRNTLISGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHYGAIIGGIVKNTLRPPIPKHCDPEWRKLMEDCWSPDPESRPSFTVITNRLRSMYKVLQEKGVVRHDR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92758g00002 677 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 431 525 - -
Stsc92758g00002 677 Gene3D Transferase(Phosphotransferase) domain 1 523 674 - -
Stsc92758g00002 677 PANTHER SERINE-THREONINE PROTEIN KINASE 531 661 - -
Stsc92758g00002 677 SUPERFAMILY Protein kinase-like (PK-like) 424 658 IPR011009 -
Stsc92758g00002 677 CDD STKc_MAP3K-like 444 660 - -
Stsc92758g00002 677 Pfam Protein tyrosine and serine/threonine kinase 439 536 IPR001245 GO:0004672|GO:0006468
Stsc92758g00002 677 Pfam Protein tyrosine and serine/threonine kinase 541 660 IPR001245 GO:0004672|GO:0006468
Stsc92758g00002 677 ProSitePatterns Protein kinases ATP-binding region signature. 444 469 IPR017441 GO:0005524
Stsc92758g00002 677 Gene3D Phosphorylase Kinase; domain 1 431 522 - -
Stsc92758g00002 677 ProSiteProfiles Protein kinase domain profile. 438 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92758g00002 Stsc-Chr92758 1519 6626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92758g00002 391 663 MAP Kinase Kinase Kinase AT1G16270 63.009 5.95e-128 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Stsc92758g00002 PK_Tyr_Ser-Thr 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92758g00002 - - adu:107474844 1181.39