Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92728g00002 ATGGGTGCTTGTTGGAGCAACCGGATTAAGGCTATTAATCCTTCCAACACAGGGTTCACTTCTAGAAGTGTCAGCAGGAATGGATATGACATCAGTTCAAGTAGCAGGAACTCATCTTCCTCCATAACTGTCCCTCCTCGAAGTGAGGGTGAGATCTTGCAGTCATCCAATTTGAAAAACTTTAGCTACAATGAGCTAAGAACCGCCACAAAGAATTTCCGGCCAGATAGTGTCTTAGGCGAGGGGGGGTTCGGTTCAGTTTTTAAGGGATGGATTGATGAGCATTCAATGGCTGCTACCAAACCAGGCATAGGAATGATTGTTGCCGTGAAGAGGCTTAACCCAGATGGGCTCCAGGGTCACAAGGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTTCAGCATCCTAATCTTGTCAAGTTGATAGGATACTGCTTGGAAGATGAGCACCGGCTTCTGGTTTATGAATTTATGCCTAAGGGAAGCGTGGAGAATCATCTGTTCAGAAGAGGTTCCTATTTCCAGCCGTTCTCTTGGAATTTGCGGATGAAAATCGCTCTTGGGGCTGCACGAGGTCTTGCTTTTCTGCACAGTACAGAAGTTCAAGTCATATACCGCGACTTTAAGACGGCAAATATCCTCCTTGATACTGTATGCACATCATTGGAGGCTCAGAGCATGTCCCTTTGTTTTGGAATATGA 705 0.4567 MGACWSNRIKAINPSNTGFTSRSVSRNGYDISSSSRNSSSSITVPPRSEGEILQSSNLKNFSYNELRTATKNFRPDSVLGEGGFGSVFKGWIDEHSMAATKPGIGMIVAVKRLNPDGLQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDEHRLLVYEFMPKGSVENHLFRRGSYFQPFSWNLRMKIALGAARGLAFLHSTEVQVIYRDFKTANILLDTVCTSLEAQSMSLCFGI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92728g00002 234 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
Stsc92728g00002 234 Gene3D Transferase(Phosphotransferase) domain 1 159 228 - -
Stsc92728g00002 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Stsc92728g00002 234 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Stsc92728g00002 234 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Stsc92728g00002 234 MobiDBLite consensus disorder prediction 16 49 - -
Stsc92728g00002 234 PANTHER OS01G0588500 PROTEIN-RELATED 39 218 - -
Stsc92728g00002 234 ProSiteProfiles Protein kinase domain profile. 73 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92728g00002 234 Pfam Protein tyrosine and serine/threonine kinase 77 218 IPR001245 GO:0004672|GO:0006468
Stsc92728g00002 234 SUPERFAMILY Protein kinase-like (PK-like) 38 218 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92728g00002 Stsc-Chr92728 2835 5201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92728g00002 49 217 Glycoside Hydrolase AT3G07070 48.824 1.16e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc92728g00002 PK_Tyr_Ser-Thr 1.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92728g00002 - - gmx:100793817 392.119