Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92728g00001 ATGGGTGCTTGTTGGAGCAACCGGATTAAGGCTATTAATCCTTCCAACACAGGGTTCACTTCTAGAAGTGTCAGCAGGAATGGATATGACATCAGTTCAAGTAGCAGGAACTCATCTTCCTCCATAACTGTCCCTCCTCGAAGTGAGGGTGAGATCTTGCAGTCATCCAATTTGAAAAACTTTAGCTACAATGAGCTAAGAACCGCCACAAAGAATTTCCGGCCAGATAGTGTCTTAGGCGAGGGGGGGTTCGGTTCAGTTTTTAAGGGATGGATTGATGAGCATTCAATGGCTGCTACCAAACCAGGCATAGGAATGATTGTTGCCGTGAAGAGGCTTAACCCAGATGGGCTCCAGGGTCACAAGGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTTCAGCATCCTAATCTTGTCAAGTTGATAGGATACTGCTTGGAAGATGAGCACCGGCTTCTGGTTTATGAATTTATGCCTAAGGGAAGCGTGGAGAATCATCTGTTCAGAAGAGGTTCCTATTTCCAGCCGTTCTCTTGGAATTTGCGGATGAAAATCGCTCTTGGGGCTGCACGAGGTCTTGCTTTTCTGCACAGTACAGAAGTTCAAGTCATATACCGCGACTTTAAGACGGCAAATATCCTCCTTGATACTAATTACAATGCCAAACTTTCTGATTTCGGGTTGGCCAGAGATGGTCCAACAGGTGATAGAAGCCATGTCTCTACTCGCGTCATGGGAACTCGGGGATATGCAGCGCCAGAGTATCTAGCAACGGGTATCATCTCTCATTTTCCAAACTATTTTTGGGTTTCTGGCACTGATCTTCCATGCAAAGAAGGAAGTATGCTTACTATGCTTTTGTGA 867 0.4556 MGACWSNRIKAINPSNTGFTSRSVSRNGYDISSSSRNSSSSITVPPRSEGEILQSSNLKNFSYNELRTATKNFRPDSVLGEGGFGSVFKGWIDEHSMAATKPGIGMIVAVKRLNPDGLQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDEHRLLVYEFMPKGSVENHLFRRGSYFQPFSWNLRMKIALGAARGLAFLHSTEVQVIYRDFKTANILLDTNYNAKLSDFGLARDGPTGDRSHVSTRVMGTRGYAAPEYLATGIISHFPNYFWVSGTDLPCKEGSMLTMLL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92728g00001 288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Stsc92728g00001 288 PANTHER OS01G0588500 PROTEIN-RELATED 39 261 - -
Stsc92728g00001 288 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Stsc92728g00001 288 MobiDBLite consensus disorder prediction 16 49 - -
Stsc92728g00001 288 Gene3D Transferase(Phosphotransferase) domain 1 159 265 - -
Stsc92728g00001 288 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Stsc92728g00001 288 ProSiteProfiles Protein kinase domain profile. 73 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92728g00001 288 Pfam Protein kinase domain 76 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92728g00001 288 SUPERFAMILY Protein kinase-like (PK-like) 38 263 IPR011009 -
Stsc92728g00001 288 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92728g00001 Stsc-Chr92728 2835 5201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92728g00001 48 263 Glycoside Hydrolase AT3G07070 52.074 8.01e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc92728g00001 Pkinase 3.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92728g00001 - - gmx:100819620 475.707