Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92587g00001 ATGAATGAACAAGGTTCCTCTTCTTCTTCTTCATCATCATCTAAGGGCAACAACAATAGCAAGAAGTCCAGTGGTGGAACATCTCCATCCTCTAAGAATAATAAGCTTTGGCAATCTCAGCCCCCCCAAGGTTCTGAGCATAAACCCTTCTCTGGCCTCTCCAATTGGTTGCATTCTGTTGCTAATAGGCAGAGTCCTAGTCCTCCATCTTCAAACCAGGCAAGAGGGGAGAGAATGGAGCACTCTGATACAGCGAGTAGTGCCGGTTTAGATGTTGTTTCGGCATCAGCAGGGCGCGATTCGGAGTCTAGTACTTCCAGGGATCCAGAAGTGGAGGAGGAGTATCAAATACAATTGGCTCTGGAGCTAAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTAGGGTCTTGTGATCCTGATAATACACCGGCTGAAGTCGTGGCCTACCGATATTGGAATTACAATGTTCTCGGTTATGATGACAAGATCTTGGATGGTTTCTATGATCTCTATGGGATTTTAACCGAGTCAACCTCTTCTAGAATGCCTTCTCTTGTCGATCTGCAAGGAACGCCGACCTCAGGTAGTGTCACATGGGAAGCTGTTTTGGTCAATAGGGCTGCTGATTCTAATTTGTTGAAACTCGAGGAAAAAGCCCTGGAGCTGACAATCATGCCAACGGGACCCAGTACAGAAGTAGTTATAGCTAGCGACTTGGTTCACAAGCTTGCACTGTTAGTGGCCGATTATATGGGTGGACCAGTTGGAGATCCCGAAAGCATGACAAGAGCATGGAAGAATCTTAGTTATAGTCTGAAAGCAACACTTGGCAGCATGGTTTTGCCACTTGGTTCTCTAACCATTGGATTGGCTAGGCATCGTGCATTGTTATTTAAGGTTCTAGCAGATAGTTTGGGCATCCCATGCCGGTTGGTGAAAGGGCAGCAGTATACCGGCTCTGACGATGTAGCAATAAATTTTGTCAAGATTGATGATGGAAGGGAATACATTGTTGATCTAATGGCAGATCCCGGGACACTTATTCCATCCGATGCAACTGGATCACACATTGACTATGTTGGATCTTCTTTTGTGGCAAGTCCTTCATCAAGAAACCTTGATTCTTCTCATGTAACATCATTGAGAAGTGGTGTTGAAAGTTCATCTGAAGAAACATCAGGGTTTGACAAAGAATCTGATATGAGCAGAGTTGCTACGAGGACGGAAGATTCAGTGGGACCCTTGAGTGAGGCAACAAGTTCCCATAATGTTGAGAAGATCACCAGGCAGGAAGCTCCAAGTAGACCGAATCAAAGATATGCACATGCAAGATCTCCTTCTTGGACTGAAGGCATTAGTTCTCCTGCCGTGCGCCGAATGAAAGTCAAAGATGTTTCATTATATATGATTGATGCTGCCAAGGAAAATCCTAACTTGGCTCAGAAGCTACATGATGTTTTACTTGAAAGTGGTGTCATTGCTCCTCCAAATTTATTTTCTGAAATTTATCACGACGAACTAGGCTCCCCAACTGAAGAAAAAGATGAACAAAAGGCAGAAAGTAGACAACAAGAGACTCAGGTTGACGAAAATCTCGGCCCTACACCATTTTTGCCTACTTTGCCTCAACGTAGAGCTCATCCGAAAGGAAGCTCGAGCGGCCAGCCGGAGCACTCAAAGCATGTAGAAGGTTTAGGAATAAACCTTCCTCTTGATCCGAAGTTAGCAGTTGTACAACATACACCATCTCAGGTAACATATGGGAAAAATGTTCCAGTTGCTGCGGCTGCAGCAGCTGCTGCTGCTGTTGTTGCTTCATCTATGGTAGTTGCTGTAGCAAAGTCAAGCACAGACTCTAACATTGAGCTGCCAGTAGCAGCAGCGGCCACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCAGCTGTCAGCAAACAGTATGAGCAAGGCAGTCGAAGTGACGGAGATGTGGACAGCTCCGGTTATGAGCCGAAGGGTAGTGGTGATGGTGAGAATATGGTGGTAGGAACAAATTCAGAGGGTGACAGAATATCTGATAGATCTATAGTAAGCAATGACAGTACAAAATCTGATTTTACATTGGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCACACTGGGTGAACGAATTGGACTTGGATCGTATGGGGAGGTATACCGTGGTGAATGGCGTGGAACAGAAGTCGCTGTAAAAAGATTTCTAGATCAAGATATCTCTGGTGAATCACTTGAAGAATTCAAGAGTGAGGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTTACTCGACCCCCGAATCTTTCTATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGACTAATTCATCGACCAAACAATCAATTAGACGAGCGAAGGCGGTTGAGGATGGCCCTCGATACTGCCCGAGGCATGAACTATTTGCACAACTGCACTCCGGTGATTGTACACCGTGATTTGAAGTCACCAAATCTTCTTGTTGATAAAAACTGGGTTGTGAAGGTATGCGATTTTGGCTTATCAAGAATGAAGCACAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCGCCTGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGCGATGTTTATAGCTTTGGAGTCATATTATGGGAGCTCTCTACTTTGCAACAGCCCTGGGGTGGAATGAATCCGATGCAAGTTGTGGGTGCTGTCGGTTTCCAGCATCGTCGCCTTGACATTCCAGATGATATGGACCCTGCCGTCGCCGATATCATCAAGCAATGCTGGCAGACAGATCCAAAGTTGAGGCCTACATTTGCGGAAATAATGGCGGCGCTGAAGCCGTTGCAAAAGCCCATCATTGGTTCTCAATCTCAAGTGGCGAGACCAGGTAAGCATGAGAAGGCTCAATCATCAAGAGTTGCTGCAGACTCAGCAGGATAG 3027 0.4536 MNEQGSSSSSSSSSKGNNNSKKSSGGTSPSSKNNKLWQSQPPQGSEHKPFSGLSNWLHSVANRQSPSPPSSNQARGERMEHSDTASSAGLDVVSASAGRDSESSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNVLGYDDKILDGFYDLYGILTESTSSRMPSLVDLQGTPTSGSVTWEAVLVNRAADSNLLKLEEKALELTIMPTGPSTEVVIASDLVHKLALLVADYMGGPVGDPESMTRAWKNLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGQQYTGSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSHIDYVGSSFVASPSSRNLDSSHVTSLRSGVESSSEETSGFDKESDMSRVATRTEDSVGPLSEATSSHNVEKITRQEAPSRPNQRYAHARSPSWTEGISSPAVRRMKVKDVSLYMIDAAKENPNLAQKLHDVLLESGVIAPPNLFSEIYHDELGSPTEEKDEQKAESRQQETQVDENLGPTPFLPTLPQRRAHPKGSSSGQPEHSKHVEGLGINLPLDPKLAVVQHTPSQVTYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSNIELPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDVDSSGYEPKGSGDGENMVVGTNSEGDRISDRSIVSNDSTKSDFTLDDVAEYDIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDMDPAVADIIKQCWQTDPKLRPTFAEIMAALKPLQKPIIGSQSQVARPGKHEKAQSSRVAADSAG 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92587g00001 1008 SUPERFAMILY Protein kinase-like (PK-like) 701 973 IPR011009 -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 375 460 - -
Stsc92587g00001 1008 FunFam Serine/threonine-protein kinase isoform 1 713 800 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 516 533 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 516 573 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 654 698 - -
Stsc92587g00001 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 87 102 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 399 413 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 375 398 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 420 460 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 1 114 - -
Stsc92587g00001 1008 Pfam Ethylene-responsive protein kinase Le-CTR1 152 356 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 984 1008 - -
Stsc92587g00001 1008 Gene3D Transferase(Phosphotransferase) domain 1 801 984 - -
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 680 698 - -
Stsc92587g00001 1008 Gene3D Phosphorylase Kinase; domain 1 715 799 - -
Stsc92587g00001 1008 Pfam Protein tyrosine and serine/threonine kinase 722 974 IPR001245 GO:0004672|GO:0006468
Stsc92587g00001 1008 ProSitePatterns Protein kinases ATP-binding region signature. 728 749 IPR017441 GO:0005524
Stsc92587g00001 1008 ProSiteProfiles Protein kinase domain profile. 722 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92587g00001 1008 FunFam Serine/threonine-protein kinase CTR1 801 984 - -
Stsc92587g00001 1008 PRINTS Tyrosine kinase catalytic domain signature 835 853 IPR001245 GO:0004672|GO:0006468
Stsc92587g00001 1008 PRINTS Tyrosine kinase catalytic domain signature 796 809 IPR001245 GO:0004672|GO:0006468
Stsc92587g00001 1008 PRINTS Tyrosine kinase catalytic domain signature 945 967 IPR001245 GO:0004672|GO:0006468
Stsc92587g00001 1008 PRINTS Tyrosine kinase catalytic domain signature 882 892 IPR001245 GO:0004672|GO:0006468
Stsc92587g00001 1008 PRINTS Tyrosine kinase catalytic domain signature 901 923 IPR001245 GO:0004672|GO:0006468
Stsc92587g00001 1008 CDD STKc_MAP3K-like 728 974 - -
Stsc92587g00001 1008 SMART serkin_6 722 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92587g00001 1008 MobiDBLite consensus disorder prediction 1 75 - -
Stsc92587g00001 1008 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92587g00001 Stsc-Chr92587 1524 9458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92587g00001 46 996 MAP Kinase Kinase Kinase AT1G73660 63.832 0.0 1159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc92587g00001 PK_Tyr_Ser-Thr 3.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92587g00001 - - gmx:100816332 1455.65