Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92539g00001 ATGTATGCAGAAACCGGTCTTCTTTTCCCTCAGATGCAGAATTTCTCTCATCACGACCTTCATCAACTCGACGAGTATTGCAATACCTTCAAGTCTAATGCTTCATTTGGTGACCCTGTTCAATCTTCTGTCATGTCGGAGTATGATTTGGCAGCAGAGGGTGATCTGTTCAAAGCACCAGAACCTATTTTTGAGGAGTCATTCATGAACCTTGATCCTGTGACGGCAGCCATCTCAATGATATCTTGTGGGGAAGATGTCTGCTCGCAGGGACTAAAATCCGCTGATATCGATGTTCTTCAAAAGGAACAACTTCTGAGTGATGTATTTTATGAGTGCGAAAAGGATCTCTTAGAAAAGGCAGCAATAGACTTGCCGTTCTCCGAGATTCTGGAAATCAAAGTTCCTGTTCTTAACACAGAGAACTCAATTGAAGAAAAGAAACAAGTTCTTGACTTGCCGCCGTTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGCTCAATGGACTGGAAGCATGGAGCTGCTATGAAGCCTGCTTTCCTTGATGTCCCGGGAATAGATTTCGATGAAGTTTATGGCATGCGGAGATCATTTAGTGAGGGAGATATAAAGACTTTAGGCAATGGCAATCTGAACATAGTCCAGTCTCCCCGTGAGAGGCATTTGCTTATCGGTAACTGCATCAAAGAGGAACGCCAGGAGAAGCTATCCAGATACAGGAATAAAAAGACCAAGAGGAATTTTGGAAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAGCCAAGAATCCGCGGAAGATTTGCGAAAACTGAAGAATATGATACCAAGAGGCAATGA 849 0.4358 MYAETGLLFPQMQNFSHHDLHQLDEYCNTFKSNASFGDPVQSSVMSEYDLAAEGDLFKAPEPIFEESFMNLDPVTAAISMISCGEDVCSQGLKSADIDVLQKEQLLSDVFYECEKDLLEKAAIDLPFSEILEIKVPVLNTENSIEEKKQVLDLPPLPKSVSSGSLSSMDWKHGAAMKPAFLDVPGIDFDEVYGMRRSFSEGDIKTLGNGNLNIVQSPRERHLLIGNCIKEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEYDTKRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92539g00001 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 166 274 IPR045281 GO:0009909
Stsc92539g00001 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Stsc92539g00001 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92539g00001 Stsc-Chr92539 4991 9732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92539g00001 231 276 C2C2-CO-like Transcription Factor Family AT5G57660 52.174 2.49e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc92539g00001 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92539g00001 - - gmx:100814332 426.017