Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92530g00001 ATGGTGAACGATGATAAATTTATAAGAGATGTTATGTTCAGTCTTTTTGCAACTGGAAGAGATACCATAACTTCGGATCTTGTATGGTTCTTTTGGCTTGTTGGAACACACCCATCAGTGAAAGCCAAGATTCTTGAAGAAATCGACAGAATTTATGGTGCTAATGATTGGAAGAAATGCAGAATTTTAGGAACAGAGGATGCGGAGAAGCTTATTTACCTACATGGTGCTCTGTATGAAGGACTGAGGCTATTTCCACCTATTCCTATTGAACGTAAGCAACCATTGAAACATGATACACTTCCTAGTGGTCATCATGTTAATCCAAACACCACCATTTTGTTGTTTACCTATGCTATGGGAAGGTTTGAAGAGGTGTGGGGAAAAGATTACATGGATTTCAAACCAGAAAGATGGATTTCAGAAAAAGGAGGAATAATACGTGTTCCATCTTATAAGTTTATTAGTTTTAATTCAGGTCCTAAGACATGTCTTGGGAAAGATATGTCTTTTTTTCAAATGAAAATAGTAGCAGCAGCTGTTTTGCGCAACTATTGTATACAAGCAGTAAAAGATCATCCTGTTATCCCAGCTCACTCGATTATACTTCTTATGAAGCATGGCCTCAAG 630 0.373 MVNDDKFIRDVMFSLFATGRDTITSDLVWFFWLVGTHPSVKAKILEEIDRIYGANDWKKCRILGTEDAEKLIYLHGALYEGLRLFPPIPIERKQPLKHDTLPSGHHVNPNTTILLFTYAMGRFEEVWGKDYMDFKPERWISEKGGIIRVPSYKFISFNSGPKTCLGKDMSFFQMKIVAAAVLRNYCIQAVKDHPVIPAHSIILLMKHGLK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92530g00001 210 PRINTS E-class P450 group I signature 7 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 PRINTS E-class P450 group I signature 154 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 PRINTS E-class P450 group I signature 27 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 PRINTS E-class P450 group I signature 164 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 SUPERFAMILY Cytochrome P450 4 209 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 157 166 IPR017972 GO:0005506|GO:0016705
Stsc92530g00001 210 Gene3D Cytochrome P450 2 207 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 Pfam Cytochrome P450 5 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 PANTHER CYTOCHROME P450 4 209 - -
Stsc92530g00001 210 PRINTS P450 superfamily signature 18 35 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 PRINTS P450 superfamily signature 76 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 PRINTS P450 superfamily signature 155 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92530g00001 210 PRINTS P450 superfamily signature 164 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92530g00001 Stsc-Chr92530 6162 6791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92530g00001 3 210 Cytochrome P450 AT2G23180 49.524 3.92e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92530g00001 - - aip:107641371 299.671