Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92477g00001 ATGCCGCTCTTGTTGTCTTTCCCAAACCCACAGTCCAAATACAGTGTTGGCATCACAATAGTAATAGCATTATTGTGCCTGCATCTTCTCGTCTTCAGAGTAGTAGTGGTGAGCTCAATGGACCTCTCATCATCATCATCTGAGGATCCCTACAAGATTCTAAACATAATCCCCAACCCAAACGGCACCTTCACCCGCCTCGATAAGTATCCAGAGAGCCCTTCCTCACCGGATCCCACTCTCCCCACACCCGTTCTCTCCAAAGACCTTACCATCGACCAATCGAAGCACACCTGGGCGCGGATCTACCTACCCCGCCAAGCACTCAATAATCCCCCTCCCAACCCCAATCTTCCCCTCATCGTCTTCTACCATGGCGGCGGTTTCGTCTTCTACCATGCCAACTCCACCTACTTCCACGACTTCTGTGTCCGCATGGCCAACGCCACCCAATCCGTCGTCGTTTCCGTCGATTACCGCCTTGCCCCTGAGCACCGCTTGCCGGCGGCGTACGAGGACTCGGTGCAGGCTCTGCACTGGATCAGAGCCTCCAATGACTTGTGGCTGGCGCGTCACGCTGATTTCTCCCGATGTTATCTCATGGGAGAGAGTGCTGGGGGAAACATAGCGTACAACGCGGGTCTACGTGCAGCCGCGGAGGCTGACCACCTCAGACCACTAAAGATCAAAGGGATGCTACTGATTCAGCCGTTTTTCGGTGGTACGAAGAGGACTCCATCGGAGTTGAGGCTGGCGAAGGACTTGAACTTGCCCCTGGCCGTTACAGATTCAATGTGGAAGCTGTCGCTGCCGGTTGGCGCTAGCCGGGATCACGAGTATTCGAATCCAACGGTGAATGGAGGGTCTAACGTGTTGGATAAGATCAGGGAGCTTCAGTGGAGGGTTGCGGTGTTTGGGTGTGATGGGGACCAGCTGGTGGACCGCCAGAAGGAGCTCGTGACGCTGCTAAAAAGCAAGAGAGTGCATGTGGTGGGCCAGTTTTATGGTGGTGGTCGCCATGGGATTTTTGTTGGTGATGCTTCCATGTCCACCAAAGTCTTTCATTTACTTAAAACTCTTCATTGA 1086 0.5378 MPLLLSFPNPQSKYSVGITIVIALLCLHLLVFRVVVVSSMDLSSSSSEDPYKILNIIPNPNGTFTRLDKYPESPSSPDPTLPTPVLSKDLTIDQSKHTWARIYLPRQALNNPPPNPNLPLIVFYHGGGFVFYHANSTYFHDFCVRMANATQSVVVSVDYRLAPEHRLPAAYEDSVQALHWIRASNDLWLARHADFSRCYLMGESAGGNIAYNAGLRAAAEADHLRPLKIKGMLLIQPFFGGTKRTPSELRLAKDLNLPLAVTDSMWKLSLPVGASRDHEYSNPTVNGGSNVLDKIRELQWRVAVFGCDGDQLVDRQKELVTLLKSKRVHVVGQFYGGGRHGIFVGDASMSTKVFHLLKTLH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92477g00001 361 PANTHER ARYLACETAMIDE DEACETYLASE 66 334 - -
Stsc92477g00001 361 Gene3D alpha/beta hydrolase 51 359 IPR029058 -
Stsc92477g00001 361 SUPERFAMILY alpha/beta-Hydrolases 66 345 IPR029058 -
Stsc92477g00001 361 Pfam alpha/beta hydrolase fold 121 343 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92477g00001 Stsc-Chr92477 2493 3704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92477g00001 79 352 Carbohydrate Esterase AT5G16080 36.749 2.34e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92477g00001 - - gmx:100777262 487.263