Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92458g00002 ATGGCAGCAATAAACCAAACCATTTTCAAGGAAGTGAGAGTGGTAGAGTCAAGACCGGAATCCGCTATCTATGAAATTTGTCTCCATATGCCACCCCGGATAGTGTCGGATGGCATATGGGCTGACGAAAAAACCAGTCAGTCTCCGTTGGAGTCGAGTTTGACATTGTTAGAGATGCAGATTCTCGTCATTTTCGGCCTAATGCATTGCTTTCATTTCGTCCTCAAGCGCTTCGGTTTCCCCTATTTCGTTTCGCAACTGTTGGTTGGCTTTGTTTTAGGCCCTTCACTGAACATAGATTGGTTGAACAAATACAAAATGAAGATGTTTCCTTATGGAACTGAAGACATATTGGGGCTAATTTCATTGTTTGGATACACATTCTACTTGTTTCTGAATTCTGTGCAAATGGATTTCAGCATGATCACAAGAAGTGGTATGAAACCTTGGGCAATGGCAGTTGCTGCTGTAGTTGGACCTTTAGCTATATGCTTGATCATAACTTGTGTAACAAGAAATGTCTGGAAAGAAGTCGCCGATCAAACCCTGAGTTTGGTGGTGATTACACAAGCTGGTTGCTCCTTTGTTGTCATAGCTTCATGCCTATCTGAACTAGACATCTTGAACTCTGAACTCGGCCGAATCGCGTTGACAACAGCGCTCTCCAGCGATTTCCTTACTGCTGTAATGAATTCTCTAAGCATTGTCTTCACCAAAACCCAAGCTGAGAAACATGATGCAGGACAAGTGATCAAGGGCATGACAGTTTATGCAGCTATTCTAATCCTAGTTCCTCTCATCGGCCGACCGACAATGAAGTGGGTGGCCAAGAACACCCCGGAAGGAAGGCCTGTGAGGAAAATATACACCTTTGTGATGGTCCTCTCAGCTCTTATCATAGGGTGTTTTGCAATACGAGCCAACCTGCCCATCATATTTGGAATTGTAATGCTAGGATTCGTCGTGCCGGAAGGTCCTCCATTAGGATCTGAACTTGTCAAGCAATTTGAGTTGATCAATGTGTGGTTCTTTGTGCCACTCTTCGTGACCTCCGCCGCCATGAAGGTAGATCTTAACACAATAGGTGATGACCCTTCCATGGCATTGGCTACAACAGGAGTAATCTTGATGGTCCATTTGATAAAGATATTCTTATGCACATTAATTTGCATTTATTGCAAGATACCAACAAGGGATACTATCTGCCTTGGTCTCATCTTATGCTGCAAAGGAGTTGTAGATATTAGCCTCTACCTATTTATGTATGAATCAGGGACTTTGAATAGTGCAACAGTTGCTACACTGTTTATATCTGCATTGATTCTGGGAAGCACTGCATATATTGGTATCAAGTCCTTGTATGATCCTTCAAGGAAATATGCAGGGTTTGAAAAGAGGAACATTTTGCATTTGAAACCTAATTCAGATCTAAGGATTGTTGCATGCATCCAAAAACCACATCATGTGAGTAGCATCAAGAATATGTTGTACCTTTGTCCAACATCAACTAGCCCTCTTGAGGTGGAAGTGCTGCACCTCATTGAGCTAGTTGGGAGTGCCACCCCGATCTTCATCTCGCACCAGCTCCAGGAATCGGCCAGCACCAGTCACAACTACTCCGGCGATATCATGGTAGCCTTTGATCTCTTCAAGCATGACAATGCCAGCAAAGTAAAAGTGAACACCTACACTGCCATATCGCCACAGCGCCTTATGTACGAAGATATCTGCCATCTTGCCCTGGACAAGGTCGCATCCCTCATCCTCCTACCATTTCATATCAGATGGGCCGATGACGGTTCTGTTGATTCGACTGAGGAGAGCATTCGGACCCTGAACAACAAGGTACTCGAAAAAGCACCATGCTCAGTTGGGATCCTTGTGAATAAAGGGCCTTGTGACAATGCATCAAAGAACATAGCCATGATCTTCTTGGGTGGTTCAGATGATAGAGAAGCACTGTGCCTTGCAAAAAGGGCAATCACAGAATCTCATTATAAAATGGTTGTGTACCATTTGGTTGGAACAAAGAATGAGTCCACAAATTGGGACATCATGCTTGATGAAGAGATGCTGAAGAGTGTGAAGGGAGTTTATGGAACTGTTAACAATGTTGCATATGAAAGGATGGTAATTGAGGACCCTTCACAAACCCAAAAATTCATTCAAACTATAGCTGCTGTGCATGATTACATCATAGTTGGGAGACGCCATGGGGTCAAATCATCTCTTACAACAGCACTTGAAAATTGGACAGAGTTCTCAGAGTTAGGTGCAATTGGGGATTTGCTTGCATCACCAGATACCAATTCTAAAGCTTCAATTTTAGTTGTGCAGCAACAGAAAATAACACAGCCTAAGTCATAA 2367 0.4326 MAAINQTIFKEVRVVESRPESAIYEICLHMPPRIVSDGIWADEKTSQSPLESSLTLLEMQILVIFGLMHCFHFVLKRFGFPYFVSQLLVGFVLGPSLNIDWLNKYKMKMFPYGTEDILGLISLFGYTFYLFLNSVQMDFSMITRSGMKPWAMAVAAVVGPLAICLIITCVTRNVWKEVADQTLSLVVITQAGCSFVVIASCLSELDILNSELGRIALTTALSSDFLTAVMNSLSIVFTKTQAEKHDAGQVIKGMTVYAAILILVPLIGRPTMKWVAKNTPEGRPVRKIYTFVMVLSALIIGCFAIRANLPIIFGIVMLGFVVPEGPPLGSELVKQFELINVWFFVPLFVTSAAMKVDLNTIGDDPSMALATTGVILMVHLIKIFLCTLICIYCKIPTRDTICLGLILCCKGVVDISLYLFMYESGTLNSATVATLFISALILGSTAYIGIKSLYDPSRKYAGFEKRNILHLKPNSDLRIVACIQKPHHVSSIKNMLYLCPTSTSPLEVEVLHLIELVGSATPIFISHQLQESASTSHNYSGDIMVAFDLFKHDNASKVKVNTYTAISPQRLMYEDICHLALDKVASLILLPFHIRWADDGSVDSTEESIRTLNNKVLEKAPCSVGILVNKGPCDNASKNIAMIFLGGSDDREALCLAKRAITESHYKMVVYHLVGTKNESTNWDIMLDEEMLKSVKGVYGTVNNVAYERMVIEDPSQTQKFIQTIAAVHDYIIVGRRHGVKSSLTTALENWTEFSELGAIGDLLASPDTNSKASILVVQQQKITQPKS 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92458g00002 788 Gene3D - 56 460 IPR038770 -
Stsc92458g00002 788 PANTHER CATION/H + ANTIPORTER 35 782 - -
Stsc92458g00002 788 Pfam Sodium/hydrogen exchanger family 64 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92458g00002 Stsc-Chr92458 4291 6875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92458g00002 26 778 Antiporter Super Family AT3G44900 36.146 1.13e-153 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92458g00002 K26731 - gmx:100778180 853.588